Nothobranchius furzeri (turquoise killifish): 107375296
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Entry
107375296 CDS
T05163
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00052
Galactose metabolism
nfu00511
Other glycan degradation
nfu00531
Glycosaminoglycan degradation
nfu00600
Sphingolipid metabolism
nfu00604
Glycosphingolipid biosynthesis - ganglio series
nfu01100
Metabolic pathways
nfu04142
Lysosome
Module
nfu_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
107375296 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
107375296 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107375296 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
107375296 (glb1)
00511 Other glycan degradation
107375296 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107375296 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107375296 (glb1)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
107375296 (glb1)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107375296 (glb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Plectin
Motif
Other DBs
NCBI-GeneID:
107375296
NCBI-ProteinID:
XP_015799234
UniProt:
A0A1A8AM31
LinkDB
All DBs
Position
sgr02:87189271..87199599
Genome browser
AA seq
649 aa
AA seq
DB search
MTPIGLISGLLLLLLGQSLEASPSFSLDYKNNCFLKDGKEFRYISGSIHYNRIPRVYWRD
RLLKMYMGGLNAIQIYIPWNYHEESPGQYNFSGDRDVEYFLKLAQDIGLLVILRPGPYIC
GEWDMGGLPAWLLKKKDIVLRSSDPDYIAAVDKWMGKLLPMIKPHLYPNGGPIITVQVEN
EYGSYIACDYNYMRHLTQLFRSHLGDEVVLFTTDGGGVNYLKCGSLQGLYATVDFGPTAN
ITAAFAAQRHAEPNGPLVNSEFYTGWLDHWGSHHSVVQSSVVAKSLDQILAKGANVNLYM
FIGGTNFGYWNGANTPYAPQPTSYDYDAPLSEAGDLTEKYYAIRDVIKMYREVPAGPVPP
TTPKYSYGAVKMKKLQTVSDAVETLSLSGPVKSVYPQTFIEINQVFGYVLYRTSLPVNCS
EPTPLSSPLNGVNDRAYVSVSGSAVGILERNKVLSVNVTGKAGSQVDVLVENMGRINFGN
SIKDFKGLVSNLTLAGVPLSGWTIYSLSIDEAVSQGLLGEEPATWTDPSPPAALSPPTFY
EGRFIIPDGIPDLPQDSYVKLPNWRKGQIWINGFNLGRYWPARGPQVTLFVPAHILSTAA
PNNVTVLELEAAPCSGQTCTVEFTDTPILNAPVESEYRHHRLFMKEDLL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgactccgatcggactgatcagcgggttgctgctgcttctgttgggacaatcactcgag
gcttctccatcgttcagcctggactacaagaacaactgcttccttaaggatgggaaagag
tttcgttacatatcaggtagcatccactacaacaggatccccagggtctactggagagat
cggctgctgaaaatgtacatgggaggactgaacgccatccagatctatattccctggaac
taccacgaagagtctccaggccagtataacttcagcggagacagagacgtggagtatttc
cttaagctggctcaggacattggtttgttggtcatccttcgtccaggaccttacatatgt
ggagagtgggacatgggtggccttcctgcctggcttctcaaaaagaaagacattgtgctg
cgatcgtcagacccagattacatcgcagccgtggataaatggatggggaagttactaccc
atgataaagcctcacctgtatccgaacggaggtcccatcatcactgtgcaggtggagaac
gaatatggcagttacattgcctgtgactacaactacatgcgtcacctgacccagctgttc
aggtctcacctgggggacgaggtggttctgtttactacagacggcggtggtgtgaactac
ctgaagtgcggctccttacagggactctacgccactgtggactttggtcctactgcaaat
ataactgctgcctttgctgcacagcgacacgctgaacctaacgggccgttggtgaattct
gaattttacacaggctggttggaccactggggctcccatcacagtgtcgtacaatcctcg
gtagtggccaagtcgctcgaccagattctggccaagggagcaaacgtcaacctgtacatg
ttcatcggaggaactaactttggatactggaacggtgctaacacgccttacgcgcctcaa
cccacaagctacgactacgacgctcccctctccgaggcaggagacctcacggagaagtac
tatgccatccgagacgtcatcaaaatgtaccgtgaggttccagcgggaccggttccacca
acaacacccaagtattcatacggtgctgtcaaaatgaagaagctccaaacggtgtcagac
gccgtggaaaccctgtcgttatctggcccggtgaagagtgtgtaccctcagacgttcata
gagataaaccaggtgtttggttatgtcctctataggaccagtttgcccgtgaactgcagc
gaacccactcctctgtcatcaccgctgaacggggtcaacgaccgagcgtatgtgtccgtg
agtgggtctgctgtaggaattctggaaaggaacaaagtcttgagtgtgaatgtgactggg
aaggctgggagtcaggtggacgtactggtggagaacatgggccgaattaacttcggcaat
tccatcaaagactttaaggggttggtgtccaatctaactctcgcgggagtccccctttct
ggctggaccatttatagcctcagcatcgatgaagcagtcagccagggtctccttggagag
gagccagccacatggacagacccatctccacctgctgctctgtcacctccgaccttctac
gaggggagatttataatcccagacggcatcccagacctccctcaggactcctacgtcaag
ctgcccaactggaggaaggggcagatctggattaacggcttcaatttaggacgctactgg
cccgctcgaggtcctcaggtgacactttttgtccccgcccacatcctcagcacggccgcg
cccaacaacgtgaccgtcctggagctggaggcggctccgtgcagcggccaaacgtgcacc
gtggagttcaccgacaccccgatccttaacgcaccggtcgagtccgagtaccgacaccac
cggctgtttatgaaagaagatctactgtga
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