Nothobranchius furzeri (turquoise killifish): 107375517
Help
Entry
107375517 CDS
T05163
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107375517 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107375517 (polr1b)
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107375517 (polr1b)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107375517 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Birna_RdRp_palm
Motif
Other DBs
NCBI-GeneID:
107375517
NCBI-ProteinID:
XP_015799565
UniProt:
A0A1A7ZJ76
LinkDB
All DBs
Position
sgr03:8608774..8618173
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSAKWSNVPTGPSLKNLTDGEFGKLKETQHAAVQDLTKAHIESFDQAVTDGLNRLVQA
IPPIEFMCRNEKLSLTFVDATIQNPLVAKGSICTEMKVFPAECRGRRSTYRGKVVADVSW
SINGFPKGIIKQSLGQVPIMVKSKLCNLYGMSPKELVKHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQFGISMRCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIHQELIKGREDNSFYKTCVSEMLRMVMEEGCTTRSSV
LSYLGERFRVKLNLPEWYTNEQCANVLLNECICIHLKSDTEKFYLLCLMTRKLFSYAKQE
CMEENPDSIVTQEVLTAGQLYLMFLKERLTAWLVSVKLSFDKRGSKLSGAWTTESVMKML
NMGSDLTKPFEYLLATGNLHSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPSMFTTSLPALFCSLGVT
PVDGTPGHAYSDCYPVVLDGALVGWVESDLAPAVVESLRRFKVLREKKIPPWMEIVLVPK
TGKASLYPGLFLFTTPCRMMRPVQNLALGMQELIGTFEQLYINVGILEGEVEAGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSA
LVRPYMYDHYSLDNYPSGTNAIVAVISYSGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVKGEDSVVFGTKAGDPKVKDRLDGDGLPHIGSVLQYGDPFYSYINLNTGQSFVTFY
KSQEACVVDNIKICSNDSGSGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLSHDATPFTFSEDSAALEY
FGKMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCIDCGSLLSPLL
EKPPPYWSAMRNRKTVCSLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLEVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcagctaagtggagtaatgtaccgacaggaccgagtctaaagaacctgacc
gatggagaattcggtaaactgaaagagacgcaacacgccgccgttcaggacctgactaaa
gcccacatcgagtcgtttgatcaggctgtcactgatggactcaaccgccttgtgcaggcg
attcctccgatagagttcatgtgcagaaatgaaaagttgagcctcacgttcgttgatgca
accatccagaacccgctggtcgccaaaggcagcatctgcacagagatgaaggtgtttcca
gcagaatgcagaggaaggaggagtacttaccgaggaaaagtggtggcagacgtcagctgg
tccatcaacggctttcccaaaggcatcattaagcagtccctgggccaggtgccgatcatg
gtgaagtcaaagctgtgtaacctctacggcatgtcccccaaggagctcgtaaagcatcac
gaagaagcagaggaaatgggaggttacttcatcgtgaacggaatcgagaaggtgatccgg
atgctgataatgccgaggaggaactatcccatcgccatgtcgagacccaagtggaagagc
aggggtcagggctacacccagtttggtatttctatgcgttgtgtgaaggaggagcacaca
gccatcaacatgaacctccattacctggaaaatgggacagtgatgctgaacttcatctac
cagaaggagctcttcttcctccctttaggttttgctctgaaggccctggtggatttcaca
gacttccagatccaccaggagctgatcaaaggccgcgaggacaattctttctacaagacc
tgcgtgtcagagatgctgcgtatggtgatggaggagggctgcaccacccgcagcagtgtg
ctcagttacctgggagagcgcttcagggtcaagctgaacctacctgagtggtacaccaac
gagcagtgtgccaacgtcctcctaaacgaatgcatttgcatccacctgaaatcggacaca
gagaagttctacctgctttgtctaatgacccggaagcttttctcgtacgccaagcaggag
tgcatggaagaaaaccccgacagcatcgtgactcaagaagtgctcacggctggtcagctg
tacctcatgttcctgaaggagcggctgactgcctggttggtctctgtcaaactgtccttc
gacaaaagaggatccaagctgtctggagcctggacgactgagtctgtgatgaagatgttg
aacatgggctcagacctgacgaagccttttgagtatttgctggccactggaaaccttcac
tccaagactggtcttggaatgctgcagaacacgggcctctgtgttgtagccgacaaactc
aacttcatccgttacctgtcccatttccgctgcgtgcaccgaggagcggcgttcgccaag
atgaggaccacctctgttcggaagctgctcccagagtcctggggattcctgtgtcccgtc
cacactccggatggagagccgtgtgggctcatgaaccacatgaccgccagctgtgaaata
gttgcaccctccatgttcaccacgtcgctgccggctctgttttgttccctcggtgtgact
cctgtggatggaactcctgggcacgcctactccgactgttaccccgtggtcctggacgga
gctcttgtgggctgggtggagagcgatttggctccagctgttgtcgagtcactgcgcagg
tttaaggtgctgagggaaaagaaaattcctccctggatggagatcgtccttgttcctaaa
acgggcaaagccagcttatatcctggcctgttcctgttcacaacgccgtgtcggatgatg
cgtcccgtacagaatttagctctcggcatgcaggagctgatcgggacctttgaacagctt
tacatcaatgtggggattttggagggcgaggttgaagcgggtgtcaccacacaccaggag
ctgttcccccacagcatgctcagtgtggtggccaacttcatcccctactctgaccacaac
cagagtcccagaaacatgtaccagtgtcagatgggtaagcagactatgggttttcctcta
cactcgttcacggaccgatccgataataagctgtaccggctccagaccccacagagcgcg
ctggtcaggccctacatgtacgaccattacagcttggacaactaccctagtggcaccaac
gccatcgtggccgtcatatcgtactcgggctacgacatggaagacgccatgatcgtaaac
aagtcgtcctgggagagaggcttcgctcatgggagcatctacaagacggagttggtggac
ctggcagagaaggtgaaaggagaggacagcgtggtgtttggaaccaaggcaggcgaccca
aaagtgaaggacaggctggatggggatggtcttcctcacatcggatcagtgcttcagtat
ggagaccccttctacagctacatcaacctcaacacgggccaaagcttcgtcaccttctac
aagagccaagaggcctgtgttgtcgataacataaagatctgcagcaacgactccggttca
gggcgttttaaacgagtctgcatcaccgtccgagtgcctcgaaaccccaccattggtgac
aagtttgctagtcgccacggtcagaaggggatcctgagccgcctgtggccggcggaggac
atgcctttcaccgagagcggtatgactcccgacattctcttcaacccccacgggttcccc
tcccgtatgaccataggaatgctcattgagagcatggctgggaagtctgccgccctgcac
ggcctcagccacgatgccacgccgttcaccttctctgaagacagcgcggcgctggagtac
tttggtaaaatgctgcgagcgggtggctacaactattatggaacagagcggctgtacagt
gggctgagcggtcaggaactggaggctgacatcttcatcggtgtcgtctactaccagcgg
ctacgtcacatggtttccgacaaattccaggtgaggaccacgggagcacgagacaaggtg
accaaccagcctgtgggaggaagaaacatccagggaggcattcgttttggagaaatggag
cgcgacgccctgctggctcacggatcctcgttcctgcttcatgaccgtctttttaactgc
tcagatcgctcggtcgctcaggtgtgcatcgactgcggcagccttctgtcaccactgctg
gagaaacctccgccctactggtctgccatgcgaaaccggaaaaccgtctgctccctgtgt
ggcaaaagtgactccatcgactctgtgtcggtcccgtacgtcttccgctacttcgtagcc
gagctcgcagcgatgaacatcaaagtcaagctggaggttaaataa
DBGET
integrated database retrieval system
