Nothobranchius furzeri (turquoise killifish): 107376712
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Entry
107376712 CDS
T05163
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107376712
04020 Calcium signaling pathway
107376712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107376712
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107376712
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Peptidase_M74
Motif
Other DBs
NCBI-GeneID:
107376712
NCBI-ProteinID:
XP_015801461
LinkDB
All DBs
Position
sgr03:complement(49718723..49831758)
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AA seq
2369 aa
AA seq
DB search
MLFVGRAYEKVFLLVYACDIKMFVLTLTSSCTWFEHVSMLVILLNCVTLGMFQPCEDVTC
LSEWCRILQVLDDCIFTFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGVMEYSL
DGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVG
VQLWAGLLRNRCFLGEDVRTIYNLSMNPYYMSEEGEDSPFICSAPRENGMLRCHNVPNYT
EDGKECSLAPPHPSSAIIGQSPGVGGASINGCVNWNQCYDTCRPGELNPHKGAVNFDNIG
YAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSET
KQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKLRRRLQRMYYGWHSK
RRKKVNPNGSGGGSNGGGNGHGQGSSRGLGTALWLRPIHNLLQHHQHQHCRLSNGGQHTV
GVATAEHTDTEGAGEELEMKVQGGSTNGSSGDNPTVVTQGVGTFFGRLNGGMNYPTILPS
FVCSYSSKTPPSHSKQSGRSPEQHTSASEHTESLNKLYQLMGQHSRQRLLFQLASVVPTP
LLLELLNCPQCAQSLESLDLELGDLEGGKSEADGLYDFPQGGDVRGCRSRLRRRGIMEYR
NGAFQAWRHFREKLKRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEELTDVLEISNIVF
TSMFVLEMGFMLLAFGFFGYIRNPYNIFDSIIVIISVWEIIGQADGGLSVLRTFRLLRVL
KLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFGLRLENGDTIP
DRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLFNLLVA
ILVEGFQAEGDANRSESDDEKKSDHFDEDEKVEQFRDTELKMYSLMMTANGHIDPRGTMA
PPIIMRTAATPMPTPKSSLGPESILEEELLYREGVSQEGEVGLGFTEAGTDYVQSRRGSS
TSMDPSAYDQRSLNLSSPGRRSPLPLRSSASSWGSRRSSWNSLGRAPSLKRRDTSGERES
LLSGEGGEEDDGLDENEEGGVNNRLKPGSSELAPPSPMCPSITTEYGDCNGRTQTYDLNV
ISDPKDDFSSEDDIDDDSPFCYWVQRELHSIKPRWCKEHENWTLYLFAPESQARIWCQSV
ISHKLFDHVVLVFIFLNCITIALERPDIQTNSKERVFLSVSNYIFTVIFLAEMAIKVVAL
GFCFGKQSYLQSTWNILDGVLVFVSLMDILVSLAYTSENRILGILRVLRLLRTLRPLRVI
SRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTKNITNK
SDCVQANYRWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPW
MLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRLKMIDKKRRSKEN
GGAEAKQRPYYADYSPLRLSIHTLCTSHYLDLFITFIICINVFTMSIEHYNQPQYLEEVL
KYCNYVFTFIFVFEALLKLVAFGFQRFFKDRWNQLDVAIVALSIMGITLEELKMKAALPI
NPTIIRIMRVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVE
LFGKLECTDSNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECHPKDTHCF
SYLPWISPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMEEERQ
RRRSTTSNNSSMGGTYIGPCPNSPEQEEDGQHNDQDLKMCVSRMHSLPNDSYMFQPPRPA
SAPYPLKEVEPTSQHHHSVSVMSIQSQPCESRTLLQVPDISPLHPQSTPTLTLPRIAPPT
PGLSPRALHRQVAVKLDSLESQGVETQERFKSTQLPSQSPSPSLSPVPPPSSSPSALSFP
SCSPSSSPFLPSPAPPSPLSPPSTPSFLLPPPPPSPRFPSRSGSLRRPRVPSAISLTDPA
DQEVYNITSGARCRWKDEDGSEPESRRKAGRSHSLSPYTLPCSLSLTFSSSSPPSTLPPS
SAMSTHSLLEEGLKDVGKGFRVDNHGFLEKPPSGPAGYCDDQRRHSIEVCLPQTLSHHLS
PESVKTFPVRVQSVGSSHRKKKTSPPCISIHPPSEREHPRLPSPPKLADCNTMLRRRTPS
SDLMPQSKDVPVDICTQVPTPLTPIHIPLPLNSPTHTSTPSLTRTLPLASAPSNIPISPN
VFIQPHAPLLPTVMHFSQTHPVSSAARHTPLAGDCIPLPRFTFEEPQSRYVSGMSAGPSD
PDPATCSSPFDSRLGSSAGFSAKNRRTAQ
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgtgggcagggcgtatgaaaaagttttcctgcttgtttacgcttgtgatata
aaaatgtttgttttgaccttaacttcctcgtgcacgtggttcgagcacgtgtccatgctt
gtgattctgctgaactgcgtgaccctggggatgtttcagccctgtgaggacgtcacctgc
ctgtcagagtggtgccgcatcttacaggtgttggacgactgcatcttcacttttttcgct
gtagaaatggtcatcaagatggtggcccttggtattttcggccccaattgttacctcgga
gataaatggaaccagcttgactttgtcatcgtaatggcaggggtgatggagtattctctg
gatggccacaacgccagcctgtcagccatccgcactgttcgggtacttcggccgctgcgg
gccatcaacagagtaccaagtatgaggatcctggtgacgctgctcctggataccctgccc
atgctgggaaatgttctcctcctctgcttctttgtctttttcatctttggcattgtgggg
gtgcagctgtgggcgggacttctgcggaaccgctgcttccttggggaagacgtaagaaca
atatacaatctgtccatgaacccttactacatgtctgaggaaggggaagacagcccgttt
atctgctcagctcctcgcgaaaacgggatgttgcgctgtcacaatgtgccaaactacact
gaggatggaaaagaatgctcattggctcctcctcacccaagttctgctataattggacaa
tctcctggagtgggaggggccagcattaatggctgtgtcaactggaaccagtgctatgac
acctgccgccccggggagctcaacccacacaagggagctgtcaactttgacaatattggc
tatgcttggatagccatattccaggtcatcacgctggaaggatgggtggacattatgtac
tatgtcatggatgctcactccttctacaattttatatattttatactgctcattattgtg
ggctctttctttatgatcaacttgtgcctcgtggtcattgccacccagttttctgagaca
aagcagagggagaacgccctgatgagggagcagcgtgctcgctacatgtccaacgactca
accctggccagctacagcgagccaggctcgtgctatgaagagatgctgcgatatatcagt
cacctttaccgtaaactgagacgcaggctgcagaggatgtactatggctggcacagtaaa
cggcgtaaaaaggtgaaccctaatggcagtggtggtggcagcaacggtggagggaatggg
cacggccaaggttcaagtaggggcctaggtactgcactgtggctgaggccaatacacaac
ctcctccagcaccatcagcaccaacactgtcgcctcagcaatggcgggcagcacacagtc
ggcgtggcgaccgctgaacacacggatacagaaggagcaggcgaagagctggagatgaag
gtccagggaggcagtacaaacggaagcagcggcgataacccgactgttgttactcaggga
gttggcacattcttcgggcgactgaacggagggatgaactatccgaccattctgccatcc
ttcgtgtgcagttacagcagcaagacgccaccttcgcactcgaagcagagcgggcgaagt
ccggagcagcatacatcagcgtctgaacacacggagtcactgaataagctctaccagctc
atgggacagcacagccgccagaggctgctgttccagttggcgagcgttgtgcccaccccc
ctgcttttggaactgctcaactgcccccagtgtgcccaaagcctggagagcttggacctg
gaactaggagacctggaaggaggcaagagtgaggctgatggactatatgatttccctcag
gggggtgatgtaagaggatgtaggagccgtttacgccgacgagggatcatggagtacaga
aacggagcttttcaggcctggagacactttagggaaaaactgaaaaggatcgttgaaagt
aaatatttcaaccgagggattatgatcgccatcctggtcaataccctcagcatggggatt
gagtaccatgaacagcctgaagaactgactgatgtgttggagatcagcaacatagttttc
accagcatgtttgtgctggagatgggcttcatgctgctggcttttggcttttttggatac
atccgaaacccgtacaacatctttgatagcatcatcgtcatcataagtgtgtgggagata
attggtcaagcggatggcgggttgtcagttctccggacgtttcgattgttgcgggtcctg
aagctggtgcgcttcctacctgccctgaggagacagctggttgtgttgatgaagaccatg
gacaatgtggcgacgttctgcatgctgctgatgctcttcatcttcacttttagtatactg
ggaatgcatctttttggatgtaaatttgggctacgattggagaatggagacaccattcct
gatcggaaaaactttgattccctactttgggctatcgtcactgtttttcagattctgacc
caggaggactggaacgtggtgctgtacaacggcatggcttctacctccccatgggcgtct
ctttactttgttgctctcatgacgtttggcaattacgtgctcttcaatttattagtagcc
atcttggtggaaggcttccaggctgagggtgacgctaatcggtcagaatcagatgatgaa
aagaaatctgaccattttgatgaggatgaaaaggtagaacagttcagagacacagagctg
aagatgtattctctgatgatgacggctaatggtcacattgaccctcgtggcactatggca
cctcctataataatgcgcacagcagcaacgcccatgcccacgcccaaaagctctttggga
cccgagtccatcttagaggaggaactgttgtacagagagggggtatctcaagaaggtgag
gttgggctgggcttcaccgaggcaggaaccgattatgtgcagtctcgccgtggaagctca
acatccatggacccctcagcctatgaccagcgctcgttgaacctctcaagtcctggaagg
cgttcccctcttcctctccgtagctctgccagctcatggggaagccgacgctccagctgg
aacagcctgggacgagcacctagcctgaaaaggcgagacactagtggagagagggagagt
ctgttgtctggggaaggtggagaggaggacgatggactggatgaaaacgaggagggtgga
gttaacaacagactaaagccagggtcttcggagctggcgcccccatcgcctatgtgtcct
tccataaccacagagtacggtgactgcaatggaagaactcaaacatatgacctgaatgta
atctccgaccctaaagatgacttctcatcggaggatgacatcgatgatgacagcccgttc
tgctactgggtccagagagaactccacagcataaagcctcgctggtgtaaggaacatgaa
aactggacgctctacttgtttgctcctgagagccaggctcgaatttggtgccaaagcgtg
atttctcacaaactgtttgaccatgtggttctggttttcatcttcctcaactgcatcacc
atcgctctggagaggcctgatattcagaccaacagcaaggagcgagtttttctgagtgtg
tccaactacattttcactgtgatcttcctggcagagatggccattaaggttgtggctctt
ggtttctgctttgggaagcagagctacctccagtctacctggaacattctggacggcgtc
ttggtgtttgtgtctctgatggacattctggtctctctggcctatacgagtgaaaatagg
atcctgggaattctaagggttcttcgccttttacgcacacttcgcccactcagggtgatc
agtcgagccccgggattaaagctggttgtggagacactcatcacctctctccgacctatc
ggaaacatcgttttaatctgctgcgcgttcttcattgtgtttgggattttgggggtccag
ctgttcaaagggaaattctaccactgtgaaggtcttgacactaaaaacatcaccaacaag
tctgattgtgtacaggccaactaccgctggatacggaggaagtacaattttgacaatttg
attcaggctctgatgtctctgttcgtgctgtcttgtaaagatggctgggtcaacatcatg
tatgatggactggatgcagttggagtggatcagcagcctgtgaggaaccataacccctgg
atgctgctctacttcatctccttcctgctcatcgtcagcttcttcgtcctcaatatgttt
gttggcgtggtggtggagaacttccacaagtgcagacaggaccaggaggaggaggaggcc
cgcctgcgcgaagagaagaggctcaaaatgattgataaaaagcgcaggagtaaggagaat
ggaggggctgaagccaagcagaggccgtactacgcagactactctcctttgcgtctgtcc
atccacacactgtgcacaagccactatctggaccttttcattacatttatcatttgcatc
aacgtcttcacaatgagcattgagcactacaatcagccacagtatttagaggaggttctg
aagtactgtaactatgtcttcaccttcatcttcgtcttcgaggccctgctaaaactggtg
gcgtttggcttccaaaggtttttcaaagacaggtggaatcagctggatgtagctattgtt
gcattatccatcatgggcatcactctggaggaactaaaaatgaaagcagcgctcccaata
aaccctaccatcatcagaatcatgagagtactcagaatagcaagagtgctgaaacttctg
aagatggcaaaagggatgagagctctgctggatactgttatgcaagcgctgccacaggtg
ggaaatcttggcctcctcttcatgctgctcttcttcatctatgctgctctgggtgtggag
ctctttggcaaactggagtgcactgacagtaatccatgtgagggtctgagtcgtcacgca
acgtttgagaactttggaatggctttcctcacgctgtttcgggtgtccactggagacaac
tggaatgggatcatgaaagacaccttacgggagtgccacccaaaggacacccactgtttc
tcgtacttgccttggatatctcccatttattttgtcacgtttgtgctcatggcccagttc
gtcctggtcaatgttgtggtagcagttttaatgaaacatctggaggagagcaacaaggag
gccaaggaggatgcagagatggatgcagagattgccttggaaatggaagaagagaggcaa
cgcagacgaagcacaacttccaacaatagctcgatgggagggacttacattggaccgtgc
ccaaattcacctgagcaagaggaagacgggcagcacaacgaccaggacctgaagatgtgt
gtgtctaggatgcactccctgccaaacgacagttacatgtttcagccaccacggcccgcc
agcgccccctaccctctgaaggaggtagagcccacctctcagcatcatcattcagtctca
gtgatgtcgatccagtcccagccctgcgagagccgcactctgctgcaggttccagacatt
tctcctcttcatcctcagtcaacaccaaccctcactcttcctcgcattgccccaccaaca
cctggactctcaccgcgggctctgcaccggcaggttgcagttaaactggactcactggag
tctcagggtgttgagacacaagagaggttcaaatctactcagctgccctcccagtccccg
tccccgtccctgtcacctgtccctcctccttcctcctctccctcagccctctctttccca
tcctgctccccttcatcttccccctttctaccctcacctgcccccccttctcctctgtct
ccaccatctactccatcattcctcctccctcctcctcctccttcccctcgtttcccctcc
cgttctgggagccttcgtagacccagggtaccatctgccatctccctcactgacccggct
gaccaagaggtgtataacatcaccagcggggctcgctgcaggtggaaagacgaggacggg
agcgagccggagagcagacggaaggccggtcgcagtcactccctgtccccctacaccctt
ccatgctcgctcagcttgaccttcagctcctcgtctcctccttccactctacctccttcc
tcagcaatgagcacacacagtctactcgaggaaggcctgaaggatgtcgggaaaggcttc
cgtgtggacaaccatggcttcctggaaaagccaccttcaggacctgcaggttactgtgat
gatcagaggcgccactccatcgaagtctgccttcctcagaccctcagccaccacttgtcg
ccagagagcgtaaagacgtttcctgtgagggtgcagtcggtcggtagcagccacaggaag
aagaagaccagccctccctgcatttccatccacccaccatcagaaagggaacacccccga
ctcccatcacctccaaaactggccgactgcaacacgatgctgagacgcaggacaccttcc
agcgacctgatgccccagtcgaaagacgtgccagtagacatctgtacgcaggtgccaaca
ccactaacaccaatccacataccacttccgttgaattccccgacccacacatcgacaccc
tctctgacgcgcactctgcctcttgcatccgctccctcaaacatccccatcagtccaaac
gtcttcattcagccgcatgcaccactcctacctactgtcatgcacttctcacaaacacac
cctgtaagttctgctgcgaggcacaccccgcttgcaggagattgcatccctcttcctcga
tttacctttgaagagccacaatccaggtatgtgagcggcatgtcggcaggcccctcagac
ccagacccagccacctgctcttctccattcgacagccgactgggaagcagcgcaggattc
agcgcgaagaatcggaggaccgctcagtaa
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integrated database retrieval system