Nothobranchius furzeri (turquoise killifish): 107386117
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Entry
107386117 CDS
T05163
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00310
Lysine degradation
nfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107386117 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107386117 (prdm6)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107386117 (prdm6)
Enzymes [BR:
nfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
107386117 (prdm6)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107386117 (prdm6)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107386117 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
107386117
NCBI-ProteinID:
XP_015815798
UniProt:
A0A8C6L5N3
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All DBs
Position
sgr11:5183103..5272185
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AA seq
638 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLVPPPPLPDRLSIPVDPLRPSRLHS
HLLASTHCTSSSSATSSSSAAASSAAALTPSSSISISTPAGLSQIPVSQQIALFGQALAP
VCSGPVGPRGGAGGPAGGGAGDLVVVVPPENQQGHNAAVELLHQAKEQSCGGVGVVSSSV
KSSGGGVEEGGKGGRFKLTSEELDYYLYGQQRMEIIPLSNHTGEANNRCDMCADNRNGEC
PMHGPLHSLRRLVGTSSTAAPVPLPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQ
GTWIGPFQGVPLLLDKLQSGPVRNTRHLWEIYDSEGTLQHFIDGNDPSKSSWMRYIRCAR
HCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPAT
VVEAMSRQESLQSLSKNGKPSSSSSSSSSTPPATLLRSMVFPHSPCPRSFSLLDKVGVGV
QSDSTFGQLGSKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCPQNP
DRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPF
KCERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagccgggcgacccgagcggctcggccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcaggctcagctgaaagctcctctggtcccgccgccc
ccccttcctgaccgcctctccatccccgtggacccgcttcgcccatcccgactgcacagc
cacctcctggcctccacgcactgcacctcctcttcctcggccacatcctcctcatctgca
gcagcttcatcagcggccgctctcaccccatcctcctccatctccatctccacccccgca
ggactctcccagatccctgtctctcaacagatcgccctctttgggcaggccctggcaccg
gtctgctccggccctgtaggacccagaggaggagcgggaggtccagcaggaggaggcgcg
ggagacctggtggtggtggtccccccggagaaccagcagggtcacaacgcagcagtggag
ctcctccatcaggccaaggagcagagctgtgggggggtcggggtggtgtcgtccagcgtg
aagagcagcgggggaggagtggaggagggaggcaaaggggggaggttcaaactcacttca
gaggagctggactactacctgtacggtcagcagaggatggagatcatccctctgagtaac
cacaccggggaggccaacaaccgttgcgacatgtgtgccgacaacaggaacggcgagtgt
ccgatgcacggtccgctccactctctgcgccgcctggttggcaccagcagcacggcggca
cccgtcccgctgccggatgtccctgattggctgagagacctgcccagagaggtctgtctc
tgcaccagtacggttcctggtctgggttatgggatctgcgcggctcagaggatccctcag
ggaacctggatcgggccgtttcagggcgttcctctgctgctggacaaactgcagtccgga
cccgtcaggaacaccagacacctgtgggagatttatgactcagaaggaactctacaacac
tttattgatggaaatgatcccagtaaatccagttggatgaggtatattcgctgtgcccga
cactgtggagagcagaacatgatggttgtacagtacaggtcctgtatcttctacagagca
tgcatggacatccccagaggaacggagctgcttgtttggtacaacgactcctacacctcc
ttcttcggcatcccgctgcagtgcatcgctcaggatgaaaacttaaacgtcccggctacg
gtggtggaggccatgtccagacaagagtccctccagtccctaagtaaaaatggaaagcct
tcctcttcctcctcgtcttcctcctccacccccccggccacgctgctgaggtccatggtc
ttcccccactctccgtgtcctcgaagtttctcgctgctggacaaggtcggcgtcggagtc
cagtccgactccacgtttggtcagctgggttctaaaaaccagcgagtcctggcgagtccc
acctctaccagccagctgagcagcgagttcagcgactggcatctgtggaagtgtggtcag
tgcttcaagaccttcacccagaggatcctgctgcagatgcacgtgtgtcctcagaaccct
gaccgaccgtaccagtgtggccactgctcccagtccttctcccagccttcggagctccgg
aaccacgtggtgacccactccagcgaccgacccttcaagtgtggctactgcggccgggcg
ttcgccggcgccaccaccctcaacaaccacatccgcacgcacaccggagagaagccgttc
aagtgcgagcgctgcgaccgaagcttcactcaggcaacccagctcagccgccaccagcga
cttcccaacgagtgcaaaccagtgaatgagagcagcgagtccatcgaggtggattaa
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