Nothobranchius furzeri (turquoise killifish): 107391426
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Entry
107391426 CDS
T05163
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107391426
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107391426
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
RasGEF_N_2
Motif
Other DBs
NCBI-GeneID:
107391426
NCBI-ProteinID:
XP_015824219
UniProt:
A0A1A8UD88
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Position
sgr15:complement(38142639..38217805)
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AA seq
1860 aa
AA seq
DB search
MQWSVQRDSRVSTGGTIQMIIMNKYLSLIFLSLAAFGQEVPSNPHGCTEGSCYPATGNLL
IGRAANLTATSTCGLRGPVQYCIVSHLQEPDKCFECDSRHPYDSYRHRNSHRIDNVIYLM
DSDGDHTWWQSINGKEDVSVRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPY
RYFASNCTRTFPRIPAKSLHQINDVICEERYSDIEPSTNGEVIFKVLDPAIPVEDPYSLD
IQELLRITNLRINFTKLNTLGDDLLDRRSDVLQKYYYAIYELVVRGSCFCYGHASECAPV
PGVNTRESGMIHGRCVCKHNTEGLNCERCKPFHNDSPWRPAEVEEPHTCTECNCNGHSDR
CHFDMAVYLATGNTSGGVCDDCQHNTMGRKCEMCKPFYYQDPNRDIRDPRACVACDCDPV
GSFEGGICDSHTNLDTGMISGQCRCKANVKGQRCDSCKNGHYGLSQSDPLGCQPCNCDPR
GIIMMDAPCDQISGDCSCKRHVIGRYCSQCEPEYWGLSNDLGGCRPCDCDFGGAYNNRCM
MDSGQCGCRKHLIGRQCSEVQPGYFCAPLDFYTYEAENANGVPPTDSSLPGKVRPQAADD
CIQHLSNQARRHRRHRRVSSSQQYQAALRRIRQLQQTPDVTTVHREHASSHIVTWTGPGF
ARVKDGAGLVFTIDNIPYAMEYDIMIRYEPESTEDWEAVVSITSVQLPSSLRCGNLLPTE
QLYTVTLLHRNRYIQMSRPFCFEPSNRYVVSIRFQRHGVAHRHLTAFILIDSLVLIPKYT
ELPGFQGNAPAAEQHRDDMIRYMCLDSFLITPMPALAEMCSKLICSISSILHDGALPCQC
DPQGSMSGECDKVGGQCRCKANVIGRRCDQCAPGTYGFGANGCTACNCHSDGSLSHQCDP
LSGQCPCRQGAMGRRCSDCQPGQWGFPSCVPCQCNGHADLCHPQTGQCADCRDSTAGHHC
ERCVDGFYGNPVLGSGDHCHPCPCPGNPGSNHFNGLSCQANATSDQIVCTCRRGYAGSRC
DRCAPGHYGNPEQPGGRCLPCECNNNIDTQEPGSCDSRTGECLRCLYHTDGPSCSHCERG
YFGNALVQDCRLCTCVPSGTLESVCHEGRCHCDRQSGDCPCRDNVNGHSCDQCSENHWNF
GQDGGCEPCSCDRQHALGPHCNLFTGQCQCRPGFGGKRCTECEPLHWGDPRLECRECSCD
PLGSETAQCDRKTGQCECRDGVTGRRCNECARGFIGDFPRCVPCHPCFQLWDDHVCMIKR
DLDHFRYTVEKILESGISPGLGDTRIKELEKNLNKVLDLIGAGDSDGVHRLVAQSIDDLS
TEILLTNGRLSDIGQELNSTAVKDEELKRILNELEKELRDVNATVAHKQELLDKYLTSGI
ADQFEKVKKYNRESLQAEERCNASVSGPGSPVEQSNRTRAVTEELMNVKKDELLRALAAQ
NNSLNELQQNSHDLERKVLRLSDTVCGGHSNSSSNGSCPESRCGGAGCRDDQGNHACGGE
GCNGTAGVALGALDKAGNVSERLNAADEELQGVMKKLQDLASLTQNVKNQTVNVLTKAQR
KKEYFESNNKKLKDLIKNIKDFLNEEGADAESIEKVALQVLAISLPLNRTNLGQMIKQIN
NSLTNLTNVGGIVNQTSQIIRDAKELLENAKDAKNRAVRVNGLVNNTKQALDLSERAVET
AKKALKEASDNLDSTKNATSEVEERLQQLEDTQMDAMMRLSNLSVGVEALRNKTEMNRQM
AKDAQAQANNATLQASSLERNLNDTEKRYQELLLKMESLGGAAGDLSSIHQKAKDMKKNA
EDLLNDAMSGIQQLDDLERRFRVNEDRMQRQRDELEDLKQNATSVRDAIHDQLQKYTSCQ
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggtctgtccagagagacagtcgggtgtctacaggtggaacgatccagatgatc
atcatgaataagtatctgagtctcatcttcctgtctctggctgcgtttggacaggaagta
ccgtccaaccctcacggctgcactgagggtagctgttatcctgcaacaggaaaccttttg
attggacgagcggccaatttaaccgccacttccacctgtggcctgcgcggaccggtgcag
tattgcatcgtgagccatttacaggagccagacaagtgttttgagtgtgactcccggcat
ccctatgattcgtaccgccacaggaacagtcaccgcatcgacaatgtcatctacctcatg
gatagcgatggagaccacacctggtggcagtccatcaacgggaaggaggatgtcagcgtc
agactcaacctggaggctgaattccacttcacacacctcatcatgaagttcaaaactttc
cgacctgcagctatgatcattgaacgttcagcggattttggtcggacatggcggccttac
cgttacttcgcctccaactgcaccagaactttccccaggatcccagccaagagcttgcac
caaataaacgacgtcatctgtgaggagcgctactctgacatcgagccctcaacaaatgga
gaggtcattttcaaagttctggatcctgcaattccagtggaagacccttacagcctggac
atccaagaacttctgcgaatcaccaacctgcgaatcaacttcacaaagctcaacactttg
ggagatgacctgcttgaccgtcgctcagacgtgttgcaaaagtattactacgccatttat
gagctggtggtccgagggagctgcttctgttacggccacgcttcagagtgcgccccggta
ccaggagtgaacactcgggagagtgggatgatccacggtcgatgtgtttgcaagcacaat
actgaaggtctgaactgcgagcgttgcaaacctttccacaacgactctccatggagacca
gcggaggtggaggagccccacacctgcacagaatgtaactgtaacggccactcggaccgc
tgtcactttgacatggccgtgtatttggccacggggaacactagtggaggagtttgtgac
gactgtcagcacaacaccatgggccgtaaatgtgagatgtgcaaaccgttctactaccaa
gaccctaacagggacatcagggacccacgcgcttgtgtcgcctgtgattgtgatccggtg
gggtcattcgaggggggcatctgtgacagccacaccaacctggatacggggatgatcagt
ggacagtgtcgctgtaaagcgaacgtgaaaggccagcgctgcgacagctgtaagaacggt
cattatggtctcagccagagcgacccgcttggatgtcagccttgtaattgtgaccctcgt
ggcatcatcatgatggacgctccttgtgatcagatcagtggagactgctcctgtaaaaga
catgtgataggacgctactgcagccagtgtgagcctgaatactggggcctcagcaacgac
ctgggcggctgcagaccttgtgactgtgattttggtggagcctacaacaaccgctgtatg
atggatagtgggcagtgtggctgcaggaaacacttaatcggtcgacagtgctcggaggtg
cagcctgggtatttctgtgctcctcttgacttttacacatacgaggctgaaaatgcaaac
ggagtccctcccacagactcctcgctgccgggcaaggttcgtcctcaggctgcagacgac
tgcattcagcatctcagtaaccaggcgagaaggcatcggcgacacagacgcgtttcaagt
tcgcagcagtatcaagcagcgctgagacgcatccggcagcttcagcagacgcccgatgtg
acgaccgtccacagagagcacgcctccagccacatcgtgacctggactggacctggtttt
gctcgagtcaaagacggcgccggcttggtgttcaccatcgacaacatcccttacgccatg
gagtatgacatcatgatccgctacgaacccgagtccacagaagactgggaggcagtggtc
agtatcacctctgtccagcttccctccagcctccggtgtggaaacctcctaccgacggag
cagctctacaccgtcacactgctgcaccgaaacagatacatccagatgtccaggccgttc
tgttttgagcccagtaaccgttatgtggtctccatcaggttccagcgacacggggtcgct
cacagacacctgaccgcttttattctcatcgactcgcttgtgctgattcccaaatacact
gagcttcctggtttccaaggcaacgctccagcggcagagcagcaccgggacgatatgatc
cgctacatgtgtctagactctttcctgatcacgccgatgcccgctctggccgaaatgtgc
tccaaactcatctgtagcatctcatccatcctccatgacggagctctgccctgtcagtgt
gaccctcaggggtcaatgagcggtgaatgtgataaggtcggaggccaatgccgttgcaaa
gcgaatgtcataggccgacgctgtgaccagtgtgccccgggaacctacggctttggagca
aacggctgcacggcttgtaactgccactccgacggctccctgagtcaccagtgtgacccg
ctctccggtcagtgtccgtgcagacaaggagccatgggccggcggtgctcggactgccaa
ccgggccagtggggcttccctagctgcgtcccctgtcagtgcaacggccacgctgacctc
tgccacccccaaacgggacaatgtgcagactgcagggacagcacagcgggacaccactgt
gaacgttgtgtggacgggttctacggaaacccggtgcttggttcgggggaccactgccac
ccctgcccctgccctgggaaccctggttcaaaccactttaacggactctcctgccaggcc
aacgccacctcggatcagatcgtttgcacctgcagacgaggttatgcaggttcccgctgt
gaccggtgtgcccccggtcactacggcaatccagagcagcccggaggacggtgccttccg
tgtgaatgcaacaataacatcgacacccaggaacctgggtcatgtgactcacgtaccggc
gagtgcctgaggtgtctgtaccacaccgacggcccgtcgtgctctcactgcgaacgcggc
tacttcggcaacgctttggtccaggactgcagactttgcacctgtgtgccgtccggcacc
ctggagtcggtttgccacgagggacggtgccactgcgaccgccagagcggagactgtccc
tgcagggacaacgtgaacggccacagctgcgaccagtgctccgagaaccactggaacttc
ggtcaggacggaggctgcgagccctgcagctgtgaccggcaacacgccctggggcctcac
tgcaacttgttcacaggccagtgccagtgtcgtccgggattcggagggaaacgctgcacc
gagtgcgagccgctccactggggagacccgcggctggagtgccgagagtgtagctgtgac
ccgctgggctcagaaaccgcccagtgtgaccgaaaaacgggccaatgcgagtgccgggac
ggagtgactgggaggcggtgcaacgagtgcgctcgaggcttcatcggcgacttccccagg
tgtgtcccctgtcatccgtgcttccagctgtgggacgaccacgtctgcatgatcaaacgg
gacttggaccacttccggtacaccgtggagaagatcctggaaagcgggatctctcccggg
ctcggggacacgcgcatcaaggagctggagaaaaatctgaacaaggtgttggatctgatc
ggtgcaggggactccgacggggtccaccggctggtcgcgcagagcatcgacgacctcagt
acagagattctcctcaccaacggacggctgtcggacatcggccaggagttgaactcaaca
gcagtaaaggacgaggagctgaagcggatcctgaatgagttggagaaagagctgagggac
gtcaacgctactgtggctcacaaacaggagctgctggacaaatacctcacctccgggata
gcagatcagtttgaaaaagtgaagaagtacaacagggagtccctgcaggctgaggagaga
tgcaacgcctctgtgtcgggccctggcagtccggtagaacaatccaacagaaccagagcc
gtcacagaggagctgatgaacgtcaaaaaagacgagctgctccgggctctggctgctcag
aacaactcattaaacgagttgcagcaaaacagccacgaccttgagaggaaggtccttcgt
ctcagcgacacggtctgtggcggtcacagcaactccagcagcaacggcagctgccccgaa
agccggtgtggtggtgcaggttgccgtgacgatcagggtaaccacgcgtgtggtggtgaa
ggatgcaacgggacggcgggcgttgctctcggagcgctggataaagccgggaacgtctcg
gagagactgaacgccgctgatgaggaactgcagggagtcatgaagaaactccaggattta
gcttctctgacccagaacgtcaagaaccagaccgtgaatgttctgactaaagcgcagagg
aagaaggagtattttgaaagcaacaacaagaagcttaaagacctcattaagaacatcaaa
gacttcctgaacgaggaaggagcagacgctgaaagcatcgagaaggtggctctgcaggtc
ttggcgatctcgctgccgctcaacagaaccaatctgggccagatgatcaagcagattaac
aacagtctgaccaacctcaccaacgtcggagggattgtgaatcaaacctcgcagatcatc
agagatgctaaagagctgcttgaaaacgctaaagatgccaagaaccgagctgtgagggtg
aacggtctggtcaataacaccaagcaggctttggatctgtctgagcgagccgtagaaaca
gcaaagaaagccctgaaggaagccagcgacaacctcgacagcaccaagaacgccacctct
gaggtggaggagaggctgcagcagctggaggacacacagatggacgcgatgatgcgtttg
agcaacctctccgtgggagtggaggctctgaggaacaagacggagatgaacaggcagatg
gcgaaagacgcccaggctcaggccaacaacgccacgctccaggcgtcttctctggagcgg
aacctcaacgacacagagaaacggtaccaggagctgctgctgaagatggagtctctgggg
ggggcggctggggatctcagcagcatccaccagaaggccaaagacatgaagaagaatgca
gaagatctcctcaacgacgccatgagcgggattcaacaactggatgatctggagagaagg
ttcagggtcaacgaggaccggatgcagcgacagcgcgacgagctggaagatctgaagcaa
aatgccacgagcgtacgagacgccatccacgaccagctgcagaagtacaccagctgtcag
tga
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