Nothobranchius furzeri (turquoise killifish): 107393082
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Entry
107393082 CDS
T05163
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107393082 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nfu04090
]
107393082 (vcam1)
04091 Lectins [BR:
nfu04091
]
107393082 (vcam1)
CD molecules [BR:
nfu04090
]
Proteins
107393082 (vcam1)
Lectins [BR:
nfu04091
]
I-type lectins (Siglecs)
107393082 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
ICAM1_3_5_D2
Ig_5
ICAM_N
C1-set
REJ
Motif
Other DBs
NCBI-GeneID:
107393082
NCBI-ProteinID:
XP_015826715
UniProt:
A0A1A8VK29
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Position
sgr17:complement(567963..586437)
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AA seq
814 aa
AA seq
DB search
MELLWGHRIFVPLISVGLLIPLWCVQGLHVEVLPRKPLFRLWDQQQLVCWVQDCPTVPTI
SWSPVDDRPLSASVSTNSTHAMLTFDPVKMEDEGQLQCKVVCGEENRLIKASVRVFSFPS
DPVITGQDQLRLGAESGLTCQVSDLYPPEMLTLTWTKGDAVLKSTVGESTSHLLESELPS
LTKEDSGENITCRATLGLQNLPDEDRIRETTTPINILYAPVVMEISDSVVLMDGSPLTLN
CSAEGNPEPNVTWTFRSPDGRPLQRHRGGLLVFGAVRVSDSGWYQCEARNTEGNHSASVN
VTVLAPPTSLSLTVNPDEEVVEGQHVNITCLSDGAPPQTLSLWRNGEELFVTNSSSSLIF
SIFSASLEDSALYLCHTSNRFGSKQVNRSVVVRAHPLQVEVSPQVSAEQGSALILTCRAS
GCLQPPTLSWRKDQIHSVLQRTQQQDGKSQLHLQELDVQHQGGYVCEAECNSVIRTREIH
VHVYAFPSDPVLEDPGPVLLKQESNFRCDVINVFSANQLRVHWLSGNTTLMSETFNFSGS
VQNVSSILKLQVQEVHQVLTCRAVLLTESGSVWRSRMTSILLQVHYPPRSTSLSVSPGEE
VMKDDTVTFTCHSDGAPLPTLVLKRSGEELLRADSASSLSFSIASTLLEDSGSYECEVWN
QYSSQRVSKNITVKAAPSNTTIHVLPSTVVQEGQNVTICSETISFPPSGVMLKNLNNGLE
LYSSDGTFLLVNVTARDSGLYQVNVSNNLGSEIKNFSISVRESVATPPPGIGIIVIPIVS
AATGLAASALILDYIRRSRKKGLYQLPQSAPPSA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgtggggccacagaatctttgttccgctgatctcagttgggttgctgatc
ccattgtggtgcgttcagggtcttcatgttgaggtgcttcccaggaagcccttgttcagg
ctttgggaccaacagcagctggtctgctgggttcaggactgtcccacggtcccgaccatt
tcctggtctccagtggacgatcgtcctctttctgcctctgtcagcaccaacagtactcac
gccatgctgacctttgacccagtcaagatggaggatgaaggacagctgcagtgtaaagtg
gtgtgtggcgaagaaaatcgactcatcaaagcatccgtcagagttttttccttcccttca
gatcccgtaatcacaggtcaggaccagctgagactaggggcagagtctggcttaacctgt
caggtgtctgacctttaccctcctgagatgctgaccctcacctggaccaaaggagatgct
gttctgaagagcaccgtgggagagtctacatcccacctgttggagtctgagctgccatcc
ctgacgaaggaggactcaggagagaacatcacctgcagggccacgctgggactccaaaac
ctgcccgatgaagacaggatcagagagaccaccacccccataaacatcctctacgctcct
gtcgtcatggagatctctgactctgtggttctgatggacggctccccgctcactctgaac
tgttcagcggaggggaacccagagccgaacgtcacctggaccttcaggagcccggatgga
cggcctctgcagcgacatcgtggtggtctacttgtcttcggagcagtgagggtttccgac
tccggctggtaccagtgtgaggctcggaacaccgaaggaaaccacagtgcctctgtgaat
gtcacggttttagctccacccacaagcctctccctgacagtgaacccagatgaggaggtg
gtcgagggtcagcacgtgaacattacctgtctttctgatggggctccgccccaaactctg
tccctgtggagaaacggggaggagctctttgtgactaactcctcctcctccctcatcttc
agcatcttcagtgcttcgctggaagactctgccctttacctgtgtcacacctctaacagg
tttgggtccaaacaggtgaaccggtccgtcgtcgtcagagcccaccctctgcaggtggag
gtgagtcctcaggtctcagcagagcaaggatcagccctgatcctgacctgcagggcctcc
ggatgcctgcaaccccccaccctcagctggaggaaggaccaaatccactctgtcctccag
aggacccagcagcaggacgggaagtcccaactccacctgcaggagctggacgtccagcat
cagggaggatacgtctgtgaggccgagtgtaactccgtcatcagaactcgagagatccac
gtccacgtctacgcattcccatctgacccagttctggaggatcccggtccagtcttgttg
aagcaggagtccaattttcgctgtgatgtcatcaatgtcttctcagccaatcagctgaga
gttcactggctgtcgggaaacacaactctgatgtcggagacgttcaacttctctggctca
gtccagaacgtctcatcgatcctgaagttgcaggtccaagaggtccaccaggttctgaca
tgcagagcggtgctgctgacggagagcggaagcgtgtggaggtccaggatgaccagcatc
cttctacaggtccactatcctccgaggtccacctccctttctgtgagtccaggagaggag
gtgatgaaggacgacacagtgacgtttacctgtcactctgacggagctccactgcctaca
ctggtgctgaagaggagtggggaggagcttctgagagctgactccgcctcttcactcagc
ttcagcatcgcctccaccctgctggaggactctggctcatatgagtgtgaagtctggaac
cagtacagctcccagcgggtctccaaaaacatcacggtcaaagctgctccgagcaacact
accatccatgttctgccctctacggtggtccaggagggacaaaatgtcacaatctgcagt
gagaccatcagcttcccaccatcaggtgtgatgctgaagaacctgaacaacggattagag
ctttattcctccgatgggaccttcctgttggtcaacgtcacggccagagactcggggtta
tatcaggtcaacgtctctaacaacctcggctctgagattaagaacttcagcatcagcgtg
agagagagcgtggccacgccccctccaggcatcggcatcatcgtcatcccgatcgtcagt
gccgccactggattagcagcttctgctctgatcttggattacatcaggagatccaggaaa
aagggtttataccagcttcctcagtctgctcctccttcagcctga
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