Novosphingobium ginsenosidimutans: FRF71_12180
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Entry
FRF71_12180 CDS
T06189
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FRF71_12180
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ngf01007
]
FRF71_12180
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngf03016
]
FRF71_12180
Enzymes [BR:
ngf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FRF71_12180
Amino acid related enzymes [BR:
ngf01007
]
Aminoacyl-tRNA synthetase
Class I (A)
FRF71_12180
Transfer RNA biogenesis [BR:
ngf03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FRF71_12180
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
EH_Signature
tRNA-synt_1
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
QEA16828
UniProt:
A0A5B8S6S6
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All DBs
Position
2471194..2472786
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AA seq
530 aa
AA seq
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MTDEALLSAAQVSKAWPFEEARKLLKRYPDGKPDGTPVLFETGYGPSGLPHIGTFQEVLR
TTLVRRAYETLTGGAPTRLVAFSDDMDGLRKVPDNIENKGLLAAYLGHPLTRIPDPFGKY
ESFAHHNNAMLREFLDQFGFEYEFVSASDRYNSGQFDDALRGVLRGWQAIMDIMLPTLRE
ERRQTYSPVLPVSPKTGQVLQVPVEVVDAEAGLVRFEDHGEIVESCILGGNSKLQWKVDW
AMRWVALGVDYEMCGKDLTDSVRESGKIARALGGRAPEGMIYELFLDENGEKISKSKGNG
LTIEQWLTYGSEESLGFYLFRDPKSAKSLHVGIIPRAVDEYWQFREKLAEQPVEQQLGNP
VWHLLRANGDAGGAGDKLPVTYGLLLNLVGVLGAGATREQVWSYLGNYVENADPAAHPQL
DKLVTNALAYNRDFIAPTLQRRKPEGNEAQALAALDEELAATSDDATAEELQNLVYEIGK
DPHYGFEQLRDWFKCLYETLLGSSQGPRMGSFIALYGIANTRKLIAEALS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaagcactcctttccgccgcacaggtatccaaggcttggccctttgaagaa
gcgcgcaagctgctgaagcggtatccggatgggaaacccgatggcacgcccgtgttgttt
gagacgggctatggtccatcgggcctgccgcatatcggcacttttcaggaggtgctccgc
accacgctggtccgccgtgcctatgaaacgctgacgggcggcgcgccgacgcggctggtt
gccttcagcgatgacatggacggcttgcgcaaggtgccggacaatatcgagaacaagggc
ctgctggctgcctaccttggccacccgctgacccgcattcccgatccctttggcaagtat
gaaagcttcgcccaccacaacaacgctatgctgcgggaattcctcgatcagttcggcttc
gagtatgagttcgtctcggccagcgatcgctacaattcgggccagttcgacgatgccctg
cgcggcgttctgcggggctggcaggcgatcatggacatcatgctgccgaccctgcgcgag
gagcgccgccagacctattcaccggtcctgccagtaagccccaagactggacaagtgctg
caggtgccggtcgaggtcgtcgatgccgaagcgggcctggtccgcttcgaagatcacggc
gagatagtcgaaagctgcatcttgggcggcaattccaagctgcagtggaaggtcgactgg
gcgatgcgctgggtcgcgctgggcgtcgattacgagatgtgcggcaaggacctgaccgat
tccgtgcgcgaaagcggcaagatcgcccgcgcgctgggcggccgcgcgccggagggcatg
atctacgaactgttccttgatgagaacggcgaaaagatctccaagtccaagggcaatggc
ctgacgatcgagcagtggttgacctatggcagcgaagagagcctcggtttttacctgttc
cgcgatcccaagagcgccaagagcctccacgtcggcattatcccccgcgcggtcgacgaa
tactggcaattccgcgaaaagctggccgagcagccggtcgagcagcaactcggcaacccg
gtctggcacctgctgcgcgccaatggcgatgcgggcggggcgggtgacaagctgccggtg
acctatggcctgctgctgaacctggttggcgtgctgggcgctggagcgacgcgggaacag
gtctggtcctatcttggcaactatgtcgagaatgccgatccggcggcgcacccgcagctc
gataagctggtcaccaatgcgctggcctataaccgcgatttcatcgccccgacgctgcag
cgccgcaaacctgagggcaatgaagcccaggcgctggccgcgctcgacgaggaactggct
gccaccagcgatgatgccacggcggaagagctacagaacctggtctacgaaatcggcaag
gacccgcattacgggttcgagcagctgcgcgactggttcaagtgcctttacgaaaccctg
cttggctcaagccaggggccgcgcatgggcagcttcatcgcgctctacggcatcgccaac
acccgcaaactgattgccgaggcgcttagctag
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