Nannospalax galili (Upper Galilee mountains blind mole rat): 103741872
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Entry
103741872 CDS
T03372
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04064
NF-kappa B signaling pathway
ngi04514
Cell adhesion molecules
ngi04668
TNF signaling pathway
ngi04670
Leukocyte transendothelial migration
ngi04933
AGE-RAGE signaling pathway in diabetic complications
ngi05143
African trypanosomiasis
ngi05144
Malaria
ngi05417
Lipid and atherosclerosis
ngi05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
103741872 (Vcam1)
04668 TNF signaling pathway
103741872 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103741872 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
103741872 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
103741872 (Vcam1)
05143 African trypanosomiasis
103741872 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
103741872 (Vcam1)
05418 Fluid shear stress and atherosclerosis
103741872 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103741872 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ngi04090
]
103741872 (Vcam1)
04091 Lectins [BR:
ngi04091
]
103741872 (Vcam1)
CD molecules [BR:
ngi04090
]
Proteins
103741872 (Vcam1)
Lectins [BR:
ngi04091
]
I-type lectins (Siglecs)
103741872 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
Ig_5
Ig_6
Ig_4
ICAM_N
Adhes-Ig_like
ICAM1_3_5_D2
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
103741872
NCBI-ProteinID:
XP_008841030
UniProt:
A0A8C6R953
LinkDB
All DBs
Position
Un
AA seq
737 aa
AA seq
DB search
MPGKMVVIFGASAVLWIMFAASQAFKIETSPEYRTLAQIGDSVSLTCSTTGCESPSFSWR
TQIDSPLNGKVRNEGTKSILTMDPVRFENEHSYLCTATCGSGKEEKGIQVDIYSFPKDPE
IHLSAPLQVGKPVTVKCLAPDVYPFDRLEMSLLKGDSLMKNQEFLEDMDKKSLETKSLEI
TFTPVIEDIGKVLVCRAKLHIDEINPKERETVKELQVYISPKNTAISVHPSTSLQEGDAV
TMTCSSEGLPAPEILWSKKLDNGNLQLLSGNATLTLIAMRMEDSGIYVCEGINPVGRNRK
EVELIVQEKPFTVDIVPGPRVTAQVGGSVVLTCAVEGCESPSFSWRTQIDSPLSGTVRSE
GAMSTLTLNPVSFDHEHSYLCTVTCRQKKLEKGIQVELYSFPRDPEIEMSGPLVHGKPVT
VNCTVPSVYPFDHLEIELLKGETTLMNKFFLEEMERKALETKSLEMTFIPTTEDTGKVLV
CQAKLHSSEMESDPKQRQSTQTLYVNVAPKDTTILVSPSHVLVEGSPVNLTCSSDGFPAP
KILWSRQLNGGELQPLSEDTTLTIISTKIEDSGIYVCEGINQAGISKNTVELIIQVSPKD
IQLTVFPSESVKEGDTVIISCTCGNLPETWIILKKKAETGDTVLKSVGGAYTIRKAQLED
AGVYECESKNEVGSQLRSLTLDVKGRENNKDYFSPELLVLYCVSSLIIPAIGMIIYFARK
ANMKGSYSLVEAQKSKV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatggtcgtgatcttcggagcctcagctgtgctgtggataatgtttgca
gcctctcaagcttttaaaatcgagacctcccctgaatacagaactcttgctcagattggc
gactctgtctccttgacttgcagcactacaggctgtgagtccccatctttctcttggaga
acccaaatagacagtccactaaatgggaaagtgaggaatgaggggaccaagtccatcctg
accatggatcctgtcagatttgagaacgaacactcttatctgtgtacagcaacttgtgga
tctgggaaagaagaaaaagggatccaggtggacatctattcgttcccaaaggatccagaa
attcacctgagtgctcctctgcaggttgggaagcctgtcacagtcaagtgtttggcccct
gatgtttacccatttgacaggctggagatgagtttactgaaaggtgactctcttatgaag
aatcaggagtttctggaagacatggacaagaagtccctggaaaccaagagtttggaaata
acctttactcctgtcattgaggatattggaaaagttcttgtttgcagagctaaattacac
attgatgaaattaatcccaaagaaagggagacagtcaaagaattgcaagtctacatctca
cccaagaatacagctatctctgtgcatccctccacaagcctccaagagggtgatgctgtg
acaatgacgtgctccagtgagggtcttccggctccagagattctctggagcaagaagcta
gataatgggaatctacagctcctctctggaaatgcaactcttactttaattgctatgagg
atggaagactctggaatttatgtgtgtgaaggaattaatccagttgggagaaacaggaaa
gaggtggaattaattgttcaagagaaaccatttactgttgacatcgtccctggaccccgg
gttacagcacaggttgggggctcagtcgtactgacatgtgctgttgaaggctgtgaatcc
ccctctttctcttggagaacccagatagacagccccctcagtgggacagtgaggagtgag
ggggccatgtccacactgactctgaaccctgtgagttttgatcatgagcactcttacctg
tgcactgtgacctgcaggcagaagaaactggaaaagggaatccaggtggagctctactca
ttccctagagatccagaaattgagatgagtggaccacttgtgcacgggaaacctgtcact
gtaaactgcacagtccctagtgtgtacccttttgaccatttggagatcgaattactaaag
ggggagactacactgatgaataagttctttttggaggaaatggaacgaaaagccctagag
accaaaagcttggagatgaccttcatccccaccactgaagatactgggaaagttcttgtt
tgtcaggctaagttacatagcagtgagatggaatctgaccccaaacaaaggcagagcaca
cagaccctttatgtcaatgttgcccccaaggacactaccatcttggtcagcccctcccat
gttctggtggaaggcagtcctgtgaacctgacctgctctagtgatggctttccagctcca
aaaatcctgtggagtagacagctgaatggtggggaactgcagcctctttctgaggataca
actcttaccataatttctacaaaaatcgaagattctggcatttatgtgtgtgaggggatt
aaccaggctggaataagcaaaaatacagttgaactgatcatccaagtttctccaaaagac
atccaacttacagtttttccttctgagagtgtcaaagagggagacaccgtcattatctcc
tgcacgtgtggaaatcttcccgaaacttggataatcctgaagaagaaagcagagacggga
gacacagtgctaaagtcggtcggtggcgcatacaccatccgcaaggctcagttggaggat
gcaggagtgtacgaatgcgaatctaaaaatgaagttggctcacagctaagaagtttaaca
cttgatgtgaaaggaagagaaaataacaaggactatttttctcctgaacttcttgtgctc
tactgtgtgtcctccttaataatacctgccatcgggatgatcatttactttgcaagaaaa
gccaacatgaaaggatcgtacagtctagtagaagcacagaaatcaaaagtgtag
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