KEGG   Naegleria gruberi: NAEGRDRAFT_33993
Entry
NAEGRDRAFT_33993  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ngr  Naegleria gruberi
Pathway
ngr03020  RNA polymerase
ngr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NAEGRDRAFT_33993
  09124 Replication and repair
   03420 Nucleotide excision repair
    NAEGRDRAFT_33993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngr03021]
    NAEGRDRAFT_33993
   03400 DNA repair and recombination proteins [BR:ngr03400]
    NAEGRDRAFT_33993
Transcription machinery [BR:ngr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NAEGRDRAFT_33993
  RNA polymerase III system
   RNA polymerase III
     NAEGRDRAFT_33993
  RNA polymerase I system
   RNA polymerase I
     NAEGRDRAFT_33993
DNA repair and recombination proteins [BR:ngr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NAEGRDRAFT_33993
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 8856624
NCBI-ProteinID: XP_002676556
JGI: Naegr1_33993
LinkDB
AA seq 130 aa
EQFEGDDNVEDEYQQGEDESEILPEDDVMLEETDDVDAPYLPVDKNKVPKEDRKTTRKMT
KFEKARVLGTRALQISMNAPVTVELQGETDPLQIAKKELQQKKIPMIIRRYLPDKSYEDW
HVNELEIDFE
NT seq 393 nt   +upstreamnt  +downstreamnt
gaacaatttgaaggtgatgacaatgttgaagatgaatatcaacaaggagaagatgaatca
gaaattcttccagaagatgatgtcatgttagaagaaactgatgatgttgatgctccatat
ttgccagttgataaaaacaaagttccaaaggaagacagaaaaaccactagaaagatgact
aaattcgaaaaggctagagttttgggaacaagagctcttcaaatttctatgaatgctcct
gttactgtagaattacaaggtgaaacagatccactccaaattgctaagaaggaacttcaa
caaaagaagattccaatgatcattagaagatacttgccagataaatcatatgaagattgg
catgtgaatgaactcgaaattgactttgaataa

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