Naegleria gruberi: NAEGRDRAFT_35014 Help Entry NAEGRDRAFT_35014  CDS       T01241                                  Name (RefSeq) hypothetical protein   KO K03018   DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] Organism ngr  Naegleria gruberi Pathway ngr03020   RNA polymerase Brite KEGG Orthology (KO) [BR:ngr00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     NAEGRDRAFT_35014  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ngr03021]     NAEGRDRAFT_35014 Enzymes [BR:ngr01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      NAEGRDRAFT_35014 Transcription machinery [BR:ngr03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      NAEGRDRAFT_35014 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 PRESAN Motif Other DBs NCBI-GeneID:  8862788 NCBI-ProteinID:  XP_002682265 JGI:  Naegr1_35014 LinkDB All DBs AA seq 1426 aa AA seqDB search MSIQPSQNVTLEEKVHERVVQHVHLPKRISQIKFSVFTPEDIRRMSTVQIYNQHYYTPDK RGFPHGPLDPRLGTGTKKDICETCGLGVADCIGHYGYVKLELPVFHIGFISNVVEVLQRI CKDCSRVLLSDSEIQSFRNKFKRPMDNQQKKALYKKVGELCKKCSQCPHCGSLNGKVTKL NAIKIVHEKYKVASTRKGKDDIDQQSREFQSEFGLAVQLNPEIEPFLGEAQDDINPIRCL RLFKNISDTDVEVLNMNPKVVRPENFILTHILVPPLVIRPTVNTDGGTNEDDLTAQMKKI IETNIILRESVEQGAIVQNFMEKWDTLQLETALYINSDTRNIPSFVTKKKVSKTLCQRLK GKHGRFRGNLSGKRANFTGRTVISPDPNLEINQVAIPELVAKVLTYPEVVNRTNKKLLQS LILNGPEVHPGANFVIKSDGIRKNLAFAKDKMEVAKNLKFGDIVERHVMNGDYALFNRQP SLHRLSIMCHRVKVLPYRTFRFNVCDCAPYNADFDGDEMNVHIPQTEEAKAEAGMLMDIL KNLITPKNGDPVISCNQDFLTAAWKMTRKNTFFDRAEFCMLCSYMGIEDKKIDLPPPTIL KPIELWTGKQLFSLLVKPNNNTNVFVNFETKAKNYLKDETMCPNDGYVCFRNSYLICGNL DKKILGDGSKSSLFYVLIRTVGPAYAAACMARVARVASRWLMNYGFSIGIDDVMPSAQLT EKKKMILSEGYAVCDEYIKLYKDGKLEPQPGCNMEQTLEAKLNRELSEIRGRAGSMCLDE LHWLNAPLTMSVCGSKGSVINISQMIACVGQQTVGGTRIANGFMNRTLPHFPMFARDPAA KGFVSNSFFTGLTPTEFFFHTMGGREGIVDTAVKTAETGYMQRRLMKALEDLFVAYDGSV RSADNTVIQFKYGDDGMDPHRMESEESGRPLNFTFVMMHEKNINLPTKDEKALTPDEIRQ KLDSFLKEKESNIFSDKFIDELSTFTNNYIFKLENLLKGVAAANSIRDENENNAWEKVVH YIEKITDRQLTSFFRACRSKYFRALAEPGEPVGGIAGQSIGEPTTQMTLKTFHFAGVASM NVTLGVPRIKEIIDATKNISTPIITAYLDTPLTATKKQKEMAARVVKGRIEKTTLGQVVN YIREVYNLGICYIEIDLDVKQISALQLDITPETVKNSILYSPLMKFEKGKEKSKDKTKLS DEPNLVQIQKGKVRVYPPSVDRDRMYFNIQKLKRYLPEVIVAGIPTTNRAVINEEKGNVY LLVEGTDLLAVMGTPGVLAKTTKTNNIIEISQTLGIESARQLIMDEIKYTTGSYGMNIDT RHIKLLADIMTFKGDIFGIQRHGIIKIRDSVLKMASFEQTTDHLFEAASHTRVDDVNGVS ECIIMGVPIPIGTGLFRLLQDAHVDKKRSLPINRKKPIFSTKSLLS NT seq 4281 nt NT seq  +upstreamnt  +downstreamnt atgagcatacaacccagccaaaatgttacactagaagagaaggtccacgagagggttgtg cagcacgtgcatcttcctaaacgtatttctcaaattaaatttagtgtttttactccggaa gatattagaagaatgtctactgtacaaatttataatcaacattattatacacctgataag agaggttttcctcatggtcctcttgatcctaggttaggtaccggaacaaaaaaggatatt tgtgagacttgtggattaggtgttgctgattgtattggacactatggatatgtaaagtta gaattacctgtttttcatattggttttatttctaatgttgtggaagttttacaaagaatt tgcaaggattgttctcgtgttttactatcagactctgaaattcaatcattcagaaacaaa ttcaagaggccgatggacaaccaacaaaagaaagctttatataagaaagttggtgaatta tgtaaaaaatgttctcaatgtcctcattgtggatcattgaatggaaaagtaaccaaattg aatgcaattaaaatagtacacgaaaagtacaaagttgcctcaacaagaaaaggaaaggat gacattgatcaacaatcaagagaattccaaagtgaatttggattggctgttcaattaaac cctgaaatcgagccatttttaggagaggcacaggatgacattaatccaattagatgtctt agattatttaaaaatatttctgatacagatgtggaagttttgaacatgaatcctaaggtt gtaaggcctgaaaactttattcttacacacattcttgttccaccacttgttattagacca actgttaatactgacggtggtactaatgaagacgatctgacagcacaaatgaagaagatt attgaaacaaatattattttgagagaaagtgttgaacaaggtgcaattgttcaaaatttt atggaaaaatgggatactttgcaacttgaaacagcactttatattaacagtgatacaaga aatattccatcatttgtaacaaagaagaaggttagtaagactctctgccaaagacttaag ggtaagcatggtagattcagaggtaatttgagtggtaaaagagccaactttactggtcgt actgtcatttcacctgatccaaacttggaaattaatcaagttgccattccagagttggtt gctaaggtacttacttatcctgaagttgtgaacagaacaaataagaaattattacagtca ttaattttgaacggcccagaggttcaccctggtgcaaactttgttattaagagtgatggt attagaaagaaccttgcttttgccaaagataagatggaagttgctaaaaatttaaagttt ggtgatattgtcgaacgtcacgtaatgaatggagactatgctcttttcaacagacaacct tcattgcacagactcagtattatgtgtcaccgtgttaaggttttaccttacagaacattc agatttaacgtttgcgactgtgctccatataacgctgactttgatggtgatgaaatgaac gttcacattccacaaacagaagaagcaaaggctgaagctggtatgcttatggatattctt aaaaatcttattactccaaagaacggtgacccagtcatttcttgtaaccaagactttttg actgctgcctggaaaatgacaagaaaaaatactttctttgatagagcagaattttgtatg ctttgttcttatatgggtattgaggataagaagattgatcttcctcctccaactattttg aaaccaattgagttatggacaggaaaacaacttttctcacttttagttaaaccaaacaat aatactaatgtatttgtcaactttgaaacaaaggctaaaaactaccttaaagatgaaaca atgtgtcctaatgatggttatgtttgctttagaaacagttatttgatttgtggtaacttg gataagaaaattcttggtgacggcagtaagagttcattgttttatgttttaattagaact gtaggtcctgcttatgctgcagcttgtatggccagagtagctagagttgcatctagatgg ttgatgaattatggtttctcaattggtattgacgatgtcatgccatctgcacaacttaca gaaaagaagaagatgattttatctgaaggttatgctgtttgtgacgaatatatcaaactc tataaggatggtaaattagaacctcaaccaggttgcaatatggaacaaactcttgaagca aaacttaacagagaactttcagaaatcagaggtagagctggtagtatgtgtttggatgag ttgcattggcttaatgctccacttaccatgtctgtctgcggttctaagggttccgttatt aacatttcacaaatgattgcttgtgtaggtcagcaaactgtcggtggtactcgtattgct aacggttttatgaacagaacacttcctcacttcccaatgtttgccagagatccagctgct aagggattcgtttcaaacagtttctttactggtcttactccaactgaattcttcttccac actatgggtggtagagaaggtatcgtcgatacagctgtcaagacagccgaaactggttat atgcaaagaagattgatgaaggctttagaagatttgtttgttgcatatgatggttctgta agatcagctgacaatactgttattcaattcaaatatggtgacgacggaatggaccctcat agaatggaaagtgaagagagtggtagacctctcaatttcacatttgttatgatgcatgag aagaatataaatcttccaaccaaggatgaaaaagctcttacacctgatgaaattagacaa aagcttgattccttcctcaaagaaaaggaatctaatatattttctgataagttcattgat gaattgagtaccttcacaaacaattatattttcaagttggaaaatttattgaagggtgtt gcagcagccaatagtattagagatgaaaatgaaaataatgcatgggaaaaggttgttcac tatattgaaaagattacagatagacaacttacttcattcttccgtgcttgtagaagcaag tatttccgagctcttgctgaacctggtgaacctgtaggcggtattgctggccaatctatt ggtgaaccaaccacacaaatgacattgaaaactttccactttgctggtgttgccagtatg aacgttactttgggtgttcctcgtattaaggaaattatcgatgctaccaagaatatcagt actcctattattactgcttacttggatactccacttacagcaactaagaaacaaaaagaa atggctgctcgtgttgttaagggtagaattgaaaagaccactcttggtcaagttgtcaac tacattcgtgaagtttacaatttgggaatttgctacattgagattgatttggatgtgaaa caaatttctgcacttcaacttgatattacacctgaaactgtcaagaatagtatattgtac tctcctttaatgaaatttgaaaagggtaaagaaaaatcaaaggataagaccaaactttct gatgaaccaaatctcgtacagattcaaaagggtaaagtaagagtttatccaccatctgta gatagagatcgcatgtacttcaatattcaaaaattgaagagatacttacctgaagttatt gttgctggtattccaactaccaacagagctgtcattaacgaagaaaaaggaaatgtttat cttttggttgaaggtactgacttgttggctgttatgggcaccccaggtgttctagccaag acaaccaagaccaacaatattattgaaatttcacaaactctaggaattgaatcagcaaga caacttatcatggatgaaatcaagtacacaactggtagttatggtatgaatatcgatacc agacacattaagctcttggctgacattatgacatttaagggtgatattttcggtattcaa agacacggtatcattaagatcagagacagtgtattgaagatggcctctttcgaacaaact acagaccatctctttgaagctgcttctcatactcgtgttgatgatgtcaatggtgtttct gaatgtattatcatgggtgttccaattccaattggtacaggtttattcagattattacaa gatgctcatgttgataagaaacgttcattaccaatcaatagaaagaagcctattttttca actaaatcattactttcataa

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