Nocardiopsis gilva: CDO52_05730
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Entry
CDO52_05730 CDS
T05022
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv00190
Oxidative phosphorylation
ngv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CDO52_05730
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDO52_05730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngv03019
]
CDO52_05730
Enzymes [BR:
ngv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
CDO52_05730
Messenger RNA biogenesis [BR:
ngv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CDO52_05730
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
AcetylCoA_hyd_C
Motif
Other DBs
NCBI-ProteinID:
ASU86054
UniProt:
A0A223SD20
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All DBs
Position
1197217..1199283
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AA seq
688 aa
AA seq
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MGQSGDNLPAERYLDREEGWLRFNQRVLELAEDTEIPLLERARYLAIFSSNLDEFFMVRV
AGLKRRLATGIAVASPSGHHPRDLLERISEVTHDLMVRHARCFHGSVRPALAEAGIRILR
WDDLEETDRQRMHRFFRRSIYPVVTPFAVDPAHPFPYVSGRSLNLAVTVSDPQTGRDTFA
RIKVPSVLPRFIEVYSEHFVPVEDVISAHLPQLFEGMEVKEHHAFRVTRNVDLEVDEDET
DDLVQSLENELLRRRFGPLVRLEVEETISDDVLDILCKELGAEEEEVYRVPGPLNLAGLD
QIADLDRPELTFSPMVPVEPRRLMNDDVLAAIRERELLVQHPYESFTATTERFIATAATD
PNVVAIKQTLYRTSGDSPIVTALIEAARAGKEVTVLVEIKARFDEQNNIQWARKLEDAGC
HVVFGVVGLKTHCKLSLVVRREDDGSLRRYCHVGTGNYNPKTARIYEDFGLFSTDPEVGE
DLSDLFNQLTGFSRKKEYRRLLVAPGGLRESLMWQIQNEMNKHAQGDPARIRMKVNSLVD
EEIVDALYEASRVGVPIDLWVRGSCVLRPGIPGLSETIRVRSILGRFLEHSRVFIFENGG
EPQVWIGSADLMPRNLDRRVEALIRVTDPEHRMRLVGMLDLAMAESTSSWRMESDGGWTR
VTRDASGEPLLDLQNTLRGDRHLRAVDG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggggcagagtggcgacaaccttccagcggaacgctacctggatcgtgaggagggctgg
ctgcgcttcaaccagcgtgtgctcgagctcgccgaggacaccgagatccccctcctagag
cgcgcccgctacctcgccatcttctccagcaacctcgacgagttcttcatggtgcgggtc
gccgggctcaaacgccgcctggccaccggcatcgccgtggcgtcgcccagcggccaccac
ccccgcgacctgctagagcgcatctccgaggtcacgcacgatctgatggtgcgccacgcc
cgctgcttccacggctcggtccgccccgccctcgccgaggcgggcatccgcatcctgcgc
tgggacgacctggaggagaccgaccgccagcgcatgcaccggttcttccggcggtccatc
taccccgtggtgaccccgttcgcggtcgaccccgcccatccgttcccctacgtctccggg
cgctccctcaacctcgcggtcaccgtctccgatccgcagaccgggcgcgacaccttcgcc
cgcatcaaggtcccctcggtgctgccgcgcttcatcgaggtctacagcgagcacttcgtg
ccggtcgaggacgtcatctccgcgcacctgccgcagctgttcgagggcatggaagtcaag
gagcaccacgccttccgcgtcacccgcaacgtcgacctcgaagtcgacgaggacgagacc
gacgacctcgtccagtcgctggagaacgagctgctgcggcgccgcttcggccccctggtg
cggctggaggtcgaggagacgatctccgacgacgtgctcgacatcctgtgcaaggaactc
ggcgccgaagaggaggaggtctaccgggtgcccgggccgctcaacctggccgggctggac
cagatcgccgacctcgaccgccccgagctcaccttctcgccgatggtgcccgtcgaaccc
cgccgcctgatgaacgacgacgtcctcgcggcgatccgcgagcgcgagctgctggtccag
cacccctatgagtcgttcacggccaccaccgagcggttcatcgcgacggccgccaccgat
cccaacgtcgtggcgatcaagcagaccctctaccgcaccagcggtgactccccgatcgtc
accgcgctgatcgaggcggcgcgcgcgggcaaggaggtcacggtgctcgtcgagatcaag
gcgcggttcgacgagcagaacaacatccagtgggcgcgcaagctcgaagacgccgggtgc
cacgtggtcttcggtgtcgtcggcctcaagacgcactgcaagctctccctggtcgtgcgc
cgggaggacgacggctccttgcgccgctactgccatgtcggtaccggcaactacaacccg
aagaccgcccgcatctacgaggacttcgggctgttcagcaccgaccccgaggtgggcgag
gacctgagcgacctgttcaaccagctgaccggcttctcccggaaaaaggagtaccggcgg
ctgctcgtcgcgcccggcgggctgcgcgagtcgctcatgtggcaaatccagaacgagatg
aacaagcacgcccagggcgatcccgcgcgcatccggatgaaggtcaactcgctggtcgac
gaggagatcgtcgacgccctgtacgaggcgtcccgggtgggtgtccccatcgacctgtgg
gtccggggcagctgcgtgctgcgtccggggatccccgggctgtccgagacgatccgcgtc
cgcagtatcctcggacggttcctggaacactcacgcgtcttcatctttgagaatgggggg
gaaccgcaggtctggatcggaagcgccgacctcatgccgcgcaacctcgaccggagggtc
gaggcgctcatccgggtgacggatcccgagcaccggatgcgcctggtgggaatgttggat
ctggcgatggcggagagcacctcctcctggcggatggagtccgacggcgggtggacgcgc
gtcacccgcgacgcctcgggcgagccgctgctggatctgcagaacaccctgcgcggcgac
cgtcacctgcgggccgtcgatggctga
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