Nocardiopsis gilva: CDO52_11695
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Entry
CDO52_11695 CDS
T05022
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv00730
Thiamine metabolism
ngv01100
Metabolic pathways
ngv01240
Biosynthesis of cofactors
ngv04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CDO52_11695
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CDO52_11695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngv03016
]
CDO52_11695
Enzymes [BR:
ngv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CDO52_11695
Transfer RNA biogenesis [BR:
ngv03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CDO52_11695
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ASU83352
UniProt:
A0A223S5D9
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All DBs
Position
complement(2564818..2566092)
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AA seq
424 aa
AA seq
DB search
MAVTSDSAAIDAREVVDATGPTPSGSGVGELCVLMKLGEIVLKGSNRKLFERRLHNNIRS
AARGLGELKVTQRGAGVIIIRMPGAADAQVHELAERMSNVMGIVWVHLVRRVAKDLDTVV
DLAVRSMADRTGSFAVKARRRDKRFPMTSSELAGYVGAKVKEAHGLPVNLKRPDNTVNIE
VDRDEVFVYTDGIPGQGGLPAGMSGRGLVLMSGGIDSPVAAHRMMRRGLKVDFLHFSGMP
FTGPESIYKAYSLVRQLDRFQVGSRLFVVPFGKAQQQLKTSGIERLQIVAQRRLMLKTAE
ALADNLGAEALITGDALGQVASQTMTNITALDDAVDLPILRPLIGMDKTEIMDQARRIGT
LSISELPDEDCCTLLTPRQVETAAKVADLRQIEKRLDAEELAEHLVTTAQLHRPSFLGEE
MAKL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccgttacgtccgactccgccgcgatcgacgcgcgagaagtcgtggacgccacgggc
ccgaccccgtccgggtcgggagtcggcgagctgtgcgtgctgatgaagctcggcgagatc
gtgctcaagggcagcaaccggaagctcttcgagcgccggctgcacaacaacatccgctcg
gccgcgcgggggctcggcgagctgaaggtgacccagcggggggccggcgtgatcatcatc
cgcatgcccggcgccgccgacgcccaggtccacgagctggccgagcgcatgagcaacgtc
atggggatcgtctgggtgcacctggtgcgccgcgtcgccaaggacctcgacaccgtggtc
gacctcgccgtgcgctccatggccgaccgcaccggctcgttcgcggtcaaggcgcggcgc
cgcgacaagcgcttcccgatgacctcctccgagctggccgggtacgtcggcgccaaggtc
aaggaggcccacgggctcccggtcaacctcaagcgccccgacaacaccgtcaacatcgag
gtcgaccgggacgaggtgttcgtctacaccgacggcatccccggccagggcggcctgccg
gcgggcatgagcgggcgcggcctggtgctgatgtccgggggcatcgactcccccgtcgcg
gcgcaccggatgatgcgccgcggcctgaaggtcgacttcctgcacttctccggcatgccg
ttcaccggcccggagtccatctacaaggcctacagcctggtgcgccagctcgaccggttc
caggtcggctcgcggctgttcgtcgtgcccttcggcaaggcccagcagcagctcaagacc
tcgggaatcgagcggctgcagatcgtggcgcagcgtcggctgatgctcaagacggccgag
gcgctcgccgacaacctgggcgccgaggccctcatcaccggcgacgcgctcggccaggtc
gccagccagacaatgaccaacatcaccgcgctcgacgacgccgtggacctgccgatcctg
cgcccgctgatcggcatggacaagaccgagatcatggaccaggcgcgccgcatcggcacg
ctgagcatctccgagctgccggacgaggactgctgcacgctcctcaccccgcgccaggtc
gagaccgccgcgaaggtcgccgacctgcgccagatcgagaagcgcctggacgccgaggag
ctggccgagcacctggtgacgaccgcccagctgcaccggccgagcttcctcggcgaggag
atggccaagctgtag
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