Nocardiopsis gilva: CDO52_19885
Help
Entry
CDO52_19885 CDS
T05022
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv00362
Benzoate degradation
ngv01100
Metabolic pathways
ngv01120
Microbial metabolism in diverse environments
ngv01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CDO52_19885 (pcaB)
Enzymes [BR:
ngv01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
CDO52_19885 (pcaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
ASU86330
UniProt:
A0A223SDX2
LinkDB
All DBs
Position
4430509..4431858
Genome browser
AA seq
449 aa
AA seq
DB search
MFGGMYAHGRVGAQVGDTAWLHALLDAEAALARACARAGVIDAAHAEAIGACCVPERFDA
SEIGRAAAASGNPVVPLVRELTRAVGGDAARHVHYGATSQDIMDTAAVLVSRRASAVIQD
DAAAVADGLAALADAHRSTLMPGRTLLQQALPTTFGLVAAGWLQAVGTASQRLGTPSPAQ
LGGAAGTLASLGEAGPRVAAAFADELGLAEPVLPWHTDRGPIAELTGALARMCGAVGKVA
GDIVLLAQTEVGEVIEAGGAGVGGSSALPHKRNPVAAVSARACAGQAPGLAAALYAAQAQ
EYQRAAGAWQSEWLPMTQLLRVTGSAVAWLRTSVERLRVDPKRMRGNLDLTGGLPLAERV
TTDLTPDLGRLPAHDLVKAACAEAVESGRDLADVLTERLDGRRTAAQVAALLDPAGYLGA
ADTFIDRAIAAHRSRAAKEDDKAEEKEHG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ctgttcggcgggatgtacgcgcacggccgcgtcggcgcgcaggtcggtgacacggcgtgg
ctgcacgcgctgctcgacgcggaggccgcgctcgcgcgagcctgcgcgcgggccggtgtg
atcgacgcggcgcacgcggaggcgatcggggcgtgctgcgttcccgagcgcttcgacgcg
agcgagatcggtcgggcagcggcggcgtcggggaacccggtggttcccctggtgcgcgaa
ctgacccgggccgtgggcggcgacgccgcgcggcatgtgcactacggggcgaccagccag
gacatcatggacaccgccgccgtgctggtgagccgccgcgcgagcgcggtgatccaggac
gacgccgctgccgtggccgacggtctggccgccctcgccgacgcgcaccgctccaccctc
atgcccggtcggaccctcctccagcaggcgctgcccaccaccttcgggctggtggcggcg
gggtggctgcaggccgtcggaaccgcgtcgcagcgtctgggcacgccctcccccgcacaa
ctcggcggagccgcgggcacgctggcgtcgctcggggaggcggggccgcgcgtcgccgcg
gcgttcgccgatgagctggggctggccgagccggtgctgccctggcacaccgaccgcgga
ccgatcgccgagctcaccggggcactggcgcggatgtgcggggcggtgggcaaggtcgcg
ggcgacatcgtcctgctggcgcagaccgaggtcggtgaggtcatcgaggcgggcggcgcc
ggagtcggggggtcgtccgccctgccgcacaagcgcaatccggtggccgcggtgtccgcc
cgggcctgtgccgggcaggcgccggggctggccgcggcgctgtatgccgcccaggctcag
gagtaccagcgtgcggcgggcgcgtggcagtcggaatggctgccgatgacgcagctgctg
cgcgtgacgggttcggcggtggcctggcttcgcacgtcggtggaacggttgcgggtggat
cccaagcggatgcgcgggaacctcgacctgaccggcggcctcccgctggccgagcgcgtc
accaccgacctcacgcccgacctcggccgcctgcccgcgcacgacctggtgaaggccgcg
tgcgcggaggccgtggagtccggccgcgacctggccgacgtgctgactgaacgcctcgac
ggacgccggaccgcggcgcaggtcgcggcgctcctcgacccggccgggtacctcggcgcc
gccgacaccttcatcgatcgggccatcgccgcccaccggtcccgcgcggcgaaagaggac
gacaaggcagaggagaaggaacacggatga
DBGET
integrated database retrieval system
