Fusarium vanettenii: NECHADRAFT_95340
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Entry
NECHADRAFT_95340 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
nhe
Fusarium vanettenii
Pathway
nhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NECHADRAFT_95340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_95340
Enzymes [BR:
nhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
NECHADRAFT_95340
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
NECHADRAFT_95340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
nSTAND3
AAA_16
CbiA
ATP_bind_1
AAA_28
AAA_22
IstB_IS21
AAA_24
Sigma54_activat
SRPRB
KTI12
Motif
Other DBs
NCBI-GeneID:
9675322
NCBI-ProteinID:
XP_003046986
JGI:
95340
UniProt:
C7Z491
LinkDB
All DBs
Position
8
AA seq
451 aa
AA seq
DB search
MSIPGLGQIPSQPTASSTRVLALRPVCEWRFQVSHGSSVIVKVLSGTAEKDGVELAPRNA
YIFSGVKSKILTWHGCELEIDGRCDSESIADYGNPTENVANSHLNLHGQLNDMRQAAARE
GREGPRVLITGGVNTGKTTLARTLTSYATRQGYQPLVVNADPKEGLLSLPGTLSASVLAT
IMDPEAVDGWGSTPTSGPSSVPVKLPLVFYYGLESPEEDPDFYRELVSKLAGSVSGRLNE
DENVKSSGVIIDGTGLPEQTKDGFDLISHIVDEFSINVVIVVGSSHISGELTKRFGSERT
SLGEPISVVPMDKSDGVVERDEMFMQHAREAAIKEYFFGDSRRTLSPLIQQVDFDNVVVY
HTPEQPTYNGETLAREEPSTPMQHWTLAIMHATPKESPDTVRAAGVMGFLYVSDVDEERR
KIKLLSPVSGRLGDQPLVWGKWPEPYINLLG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattccaggcctgggccagatcccctcgcagcccaccgcctcttctacccgcgtc
ctcgccctccgtcccgtctgcgaatggcgattccaagtctcccacggctcgtccgtcatt
gtcaaggtcctctctggtacagctgagaaggatggggtcgagctagcccctcgcaatgcg
tacatcttttctggcgtcaagtccaagatcctaacctggcacggatgcgagctcgagatt
gacggacgctgcgacagcgaatccatcgccgactacgggaacccgaccgagaatgtcgcc
aattcacatctgaacctacatgggcagcttaacgatatgcgccaagcggcggcaagagaa
ggaagagaagggccgagggttctcattacaggaggagtcaacacgggcaagacgacgctg
gcgaggactctgacgagttatgcgacgagacagggctaccagcccttggtggtgaatgca
gaccccaaggaagggctgcttagtcttccagggacgctgagcgccagtgtgcttgcgacc
atcatggatcctgaggcagtggacggttggggtagtacaccaacaagtggcccaagcagc
gtccctgtcaagctacctttggtattctactatggactagagtctcccgaggaggatccc
gacttttaccgtgagcttgtcagtaaactggcgggtagcgtgagtggacggttgaacgaa
gacgagaatgttaagagctcaggtgttatcatcgatggcacgggtctccccgagcagacc
aaggacgggtttgacctcatttcgcatattgtggatgaattctccatcaatgttgtcatc
gtggttggctcctcgcatatcagtggggagttgaccaagcgctttggaagcgaacggacg
agccttggagagcccatcagtgtggtgcccatggacaagtccgacggcgtcgttgagcgt
gacgagatgtttatgcagcacgcgagggaggccgctatcaaggagtacttctttggtgac
tcgagacggaccttgagccccctgattcagcaggtagactttgacaatgtcgtcgtgtac
catacaccagagcaaccgacatacaacggcgagacattagcccgcgaagagccgtcgaca
ccaatgcaacactggacgctggccatcatgcacgcgacacctaaggagtcgcccgatacg
gtccgcgccgcaggcgtcatgggtttcctctacgtgtccgatgtggatgaggagcgacgc
aagatcaagctactctcgccggtgagcgggcggttgggcgatcagccactcgtgtggggg
aagtggccggagccgtacatcaacctgcttggatga
DBGET
integrated database retrieval system
