Nibribacter ruber: GU926_00290
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Entry
GU926_00290 CDS
T06388
Name
(GenBank) PAS domain S-box protein
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
nib
Nibribacter ruber
Pathway
nib02020
Two-component system
nib02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GU926_00290
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GU926_00290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
nib02022
]
GU926_00290
02035 Bacterial motility proteins [BR:
nib02035
]
GU926_00290
Enzymes [BR:
nib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
GU926_00290
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
GU926_00290
Two-component system [BR:
nib02022
]
CheA family
CheA-CheYBV (chemotaxis)
GU926_00290
Bacterial motility proteins [BR:
nib02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
GU926_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
PAS_10
HATPase_c
PAS_3
PAS_4
CheR_N
PAS_9
PAS
HATPase_c_5
HisKA
Fez1
HATPase_c_2
Methyltransf_12
Nucleoporin_FG2
Wtap
Motif
Other DBs
NCBI-ProteinID:
QHL85963
UniProt:
A0A6P1NYJ3
LinkDB
All DBs
Position
complement(71064..75146)
Genome browser
AA seq
1360 aa
AA seq
DB search
MKSTLLAVTPPKTDHYLVGIGASAGGLEAIHTLFDYFPNNSSFSFVIIQHLSPDHKSLMA
ELLSKHTQMQVREAEDNMRTRPNCVYVLPSGKQLTIEKGRLHLVNQIRNREPNFAIDVFF
ESLAKDMGKYAIGIILSGTGSDGTKGVKKIKSAGGMVMVQDPATAKFDGMPRSAIEAGFV
DYVFSPERMPGEIIEYTRQIPLVKTLIDKNLIEEDEEVLKEILDLICTHTQTNFKNYKQA
TIYRRLKKRMDTLKVETLPDYLAYLHDHPAEIKQLCQEFLIGVTRFFRDQEAFDLLEQEV
IPEIVANTPEEELVKVWVTACSTGEEVYSLAILFQECLERLGRPVNVKLFATDIDQRAIK
QASKASYPASISKDVSPERLQKYFHLKGNRYTVKEHVRGMVVFAQHDLQKDPPFSRMDLI
TCRNMLIYLNPDLQQRVLSVFPYALKQNGYLLLGSSEHIGEMKTYFAERNRKWKLFQKIK
DKRGVQQNYGITPQAHTFPVEHSPSYKNAQLVKYNDLFMDAVADEFKITGLYVDDNFQLL
HGVGDINRFLKLPDKRLHLNLLKMVPKELAVTLSVDIRKVIKTQKPVARQVMMLLGKKSQ
LVHLSVRPITVEPDQPKVLLVLLQEMGKAAPSLKNLKPSLITEEDSEYFQQLTTLESELR
EARESLHMTVQDLSTANEELQSTNEELMSSNEELQSSNEEMQSLNEELHTVNSEHQLKIR
ELQELNEDLDNYIRSSNIGQLFLDHHLTIRKFTPTVKNIINIIDIDLGRPIHHLSHNLRY
PNLLEDIQKVNNTSYEVEQEVETQDGRYYLLRIIPYLKHDGNKDGVVLSFVDVTTLKTLS
NVVQGVLNSSLNNIMAFRAVRTGEQEITDFHWTLLNKQAEQLVGTPQAHLIGKSVMEDLS
FMKKNGLFKKFARVVETGKPLHLEQHLDFNGKRAWYEIVAVKMGDGFTVTFANITDKKES
EEKILMAYEDLKKAEENLILLNNQLEERVVERTKEMTESQERFKLVSKATNDVVWDWNLI
TNELWWSDTLESILGYSHTEMENGIDSWFNKIHEEDRQRVLKGINEAINSGKDQWIAEFK
LARADGSYAYIYNRAYILHNEYQMPHRVLGSFIDLTDLKETQEKLKETNNHLLLVIEDLD
NFVYTASHDLKAPILNIEALLRELRLELPEEDYEQVELHQIIQMMQGAVERFKKTIDNLT
EVTKLQNEQHGVIEKIKVGELIEDIVLDMDQMFKASGVQLKIDVKQCPIISFSEKNLRSI
IYNLISNSIKYRSLDQEPYIHLSCLSESGYSVLKVEDNGLGMNPAQEEQLFSMFTRFHDH
VEGSGIGLYMVKKIVQNAGGKIEVSTKVGKGTTFKIYFPK
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcacgctcctcgcagttactcccccaaaaacggaccattacctggttggcatt
ggcgcttctgccggtgggctggaggctatccatacgttgtttgactactttcccaacaac
tccagtttttcgttcgtcattatccagcacctgtcaccggaccataaaagcctcatggcc
gagctgttgtccaagcacacccagatgcaggtgcgggaggccgaggacaatatgcgcacc
cgtcccaactgcgtgtacgtgctgcccagcggcaaacaactcaccatagaaaaaggccgg
ttgcacctggtcaaccaaattagaaaccgggagcccaactttgccattgacgtcttcttt
gagtcgctggccaaggacatgggcaaatacgccattggcatcattctgtcgggcacgggc
tcagacggcaccaagggcgtcaagaaaatcaagtcggcgggaggcatggtcatggtgcag
gatcccgccaccgccaagtttgacggcatgccccgcagcgctattgaggccgggtttgta
gactacgtcttctccccggaacgaatgcccggtgaaatcattgaatacacacgccagata
ccgttagtgaaaacactcattgacaagaacctgatagaggaagacgaagaggtgctcaaa
gagattctggacctcatctgtacgcatacccagaccaatttcaagaactataaacaagcc
accatttaccgccgcttgaaaaagcgcatggacaccttaaaggtagaaaccctgccggac
tacttagcttacctgcatgaccaccccgctgagatcaagcagctgtgccaggagtttctg
ataggcgttacccgttttttcagggaccaggaagcgtttgacttgctggagcaggaggtg
ataccagagattgtggccaatacccccgaagaagaactggtcaaggtatgggtgacggcc
tgcagcaccggggaagaggtgtattccctggctattctgtttcaggagtgcttagagcgc
ctgggccggcccgtgaacgtgaaactgttcgccactgacattgaccagcgggccattaaa
caggcatccaaagccagttacccggcctccatctccaaagacgtaagcccagagcggctg
cagaaatacttccacctgaagggcaaccggtacaccgtcaaagagcacgtgcggggcatg
gtggttttcgcgcagcatgacctgcagaaagacccgccgttcagccgcatggatttgatt
acatgccgcaacatgctcatttacctcaacccagacctgcagcaacgggtgctgtctgtg
ttcccatacgccttaaaacagaacggctacctgctgctgggctccagtgaacacattggc
gagatgaaaacctattttgccgaacgcaaccgcaaatggaagctcttccagaaaattaaa
gacaagcgtggggtgcagcagaactacggcatcacgccgcaggcgcacacgtttccggtg
gagcacagcccttcgtacaaaaacgcccagctggtcaagtacaatgacctgttcatggat
gccgtggcagacgagttcaagatcaccggcctgtacgtagacgacaacttccagctgctg
cacggcgtgggcgacattaaccggttcttgaaactgccagacaagcgcctgcacctgaac
ctgctcaaaatggtgcccaaggaactggccgtcactctgagcgtggacattagaaaagtc
attaagacccagaagccggtggcccgccaggtcatgatgctgctgggcaagaaaagccag
ctggtgcatttgtctgttcggccgattacggtggaaccagatcaacccaaggtgctgctg
gtgttgctgcaggaaatgggcaaggccgcgccttcgctcaagaacctcaagccctcgctc
atcacagaagaagactcagagtattttcagcaactcaccaccttggagagtgaattgcgc
gaggcccgcgaaagcctgcacatgaccgtgcaggacctgagcaccgcaaatgaagaacta
cagtctaccaatgaggagctcatgtcttcaaacgaagaactgcaaagctccaatgaagag
atgcaatccctgaacgaggaattgcacaccgtcaactctgagcatcagcttaaaatccgg
gaactgcaggagctcaacgaagacctagacaactacatcaggagctccaacatagggcag
ctcttcctggaccatcacctcaccatccggaagttcacgcccacggtgaaaaacatcatc
aacatcattgacatagacctgggccggcctattcatcacctgtcccacaatctgcggtac
cccaacctgctggaagacatccagaaggtgaacaacacgtcttatgaggtggagcaggaa
gtagaaacccaggacggccggtattacctgctgcgcatcatcccctacctcaagcatgac
ggtaacaaagacggcgtggtgttgagttttgtagacgtgactacgctcaagaccttaagc
aacgtggtgcagggcgtgctcaacagctcgctcaacaacatcatggcgttcagggcagtg
cgcacgggtgaacaggagattacagacttccattggacgcttctgaacaagcaggccgag
caactggtgggcactccgcaggctcacttgataggcaagagcgtgatggaagacctgtct
ttcatgaagaaaaacggactgttcaagaagtttgcgcgcgtggtggaaaccggcaagccc
ctgcacctggagcagcacctggacttcaacgggaaacgtgcttggtatgagattgtggct
gtgaaaatgggcgatggcttcaccgtgacctttgccaacatcacagataaaaaggaaagc
gaggaaaagattctgatggcctacgaggatctcaagaaagccgaggagaacctcatcttg
ctcaacaaccagttagaggagcgtgtggtggagcgcaccaaagagatgaccgaaagccag
gagcgtttcaagctggtttccaaggccaccaatgacgtggtctgggactggaacctgatc
accaatgagctctggtggagtgacaccttggagtccattctgggttacagccacactgaa
atggagaacggcattgactcctggttcaataaaattcacgaagaagaccgccagcgcgta
ctaaaaggcattaatgaggccatcaactcaggcaaggaccagtggattgctgaatttaaa
ctggcccgtgccgacggttcttacgcctacatttacaaccgcgcctacattctgcacaac
gagtaccagatgccgcaccgcgtgcttggttctttcattgacctcaccgacctgaaggaa
acccaggagaaactcaaggaaaccaacaaccatctgctgctggtcatagaagacctggac
aacttcgtgtacacggcgtcgcatgacctcaaggcccccatcctgaacattgaggcgctg
ctacgggaactacgcctggaactgcccgaagaagattacgaacaggtagaattgcaccag
atcattcagatgatgcagggagcggtggagcgtttcaaaaagaccattgacaacctcact
gaagtgaccaagctccagaacgagcagcatggcgtcattgagaaaatcaaggtgggtgag
ttgattgaagacatcgttctggacatggaccagatgttcaaggcctctggcgtgcagttg
aagattgacgttaaacaatgccccatcatctccttctctgagaagaacctgcgcagcatc
atttacaacctgatctccaacagcatcaaataccgttctctggaccaggagccttacatt
catctgtcctgcttaagtgaaagtgggtacagtgtcttaaaagtagaagacaacggcctg
ggtatgaatcccgcgcaggaagaacagctcttctccatgttcacccgcttccatgaccac
gtagaaggcagcggtattggcctgtacatggtcaagaagattgtgcaaaacgctggcggc
aagattgaagtctccaccaaagtaggcaaaggcaccaccttcaaaatctatttccctaag
tag
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integrated database retrieval system
