Nibribacter ruber: GU926_14085
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Entry
GU926_14085 CDS
T06388
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nib
Nibribacter ruber
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nib03009
]
GU926_14085 (rimO)
Enzymes [BR:
nib01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GU926_14085 (rimO)
Ribosome biogenesis [BR:
nib03009
]
Prokaryotic type
ribosomal protein modification factors
GU926_14085 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QHL88499
UniProt:
A0A6P1P274
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All DBs
Position
3339530..3340894
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AA seq
454 aa
AA seq
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MKVRSLKQDKYNVITLGCSKNLVDSEVLMGQLQANEFDVVHDSEKDDANIIIVNTCGFID
NAKQESIDTILRYADAKDAGAIDKLYVTGCLSQRYKDSLETEIPQVDAFFGTMELPQLLK
TLEANYKHELIGERLITTPSHYAYFKIAEGCNRPCSFCAIPLMRGKHMDRPMEDLVREAT
RLANMGTKELILIAQDLTYYGLQQYGERKLAELLQRLSDVNGIEWIRMQYAYPSQFPMDA
LDVMAERSNICKYLDMPLQHISDNMLKTMRRGISKRRTLELVDTIRQRVPDIALRTTLIA
GHPGETQKDFEEMYQWVEESRFDRLGIFTYSHEENTHAFSLEDNVPEEVKQERADTIMEL
QQGISMELNEAKVGNTYKVLFDRKESGYYVGRTQYDSPEVDNEVLVPADSAYVRLGDFAN
VKITDSSDFDLYGEVVGSAQESAMHISTVDAISE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtaagatcccttaaacaagacaaatacaacgtaatcaccctgggttgctccaaa
aatctggtagactcagaggtgctgatgggccagttgcaggccaatgagtttgatgtagtg
catgactctgagaaagacgatgccaacatcatcattgtgaacacctgcggctttattgac
aatgccaagcaagagtctattgacaccattctgcgctacgcagacgccaaagacgccggg
gccattgacaaactctacgtgaccggttgcctttcgcaacgctacaaagattctttagaa
actgagattccgcaggtagatgctttttttggtaccatggaactgccacagctcttgaaa
accttagaagccaactacaagcatgagttgattggtgagcggctaatcaccacgccttca
cattacgcctactttaaaatagccgagggctgtaaccgtccctgctcgttttgcgccatc
cccttgatgcgcggcaagcacatggaccgcccaatggaggacttggtacgcgaagccacg
cgcctagccaacatgggtaccaaagaactgatcctgattgcccaagacttaacctattac
ggcttacagcaatacggtgagcgcaagctagccgagttattacaacgcttgtctgacgtg
aacggcattgagtggattagaatgcaatacgcctacccgtctcaattcccgatggatgcg
ttggacgtaatggccgaacgttctaacatctgcaagtacctggacatgccgttgcagcac
atctctgacaacatgctcaagacaatgcgccgcggtatttctaagcgtcgtacgctggag
ctggtagacaccattcgtcagcgcgtaccagacatcgcgctacgcactaccttgattgcc
ggtcaccctggtgagacgcagaaggacttcgaggagatgtaccagtgggtagaagaatca
cgctttgaccgcctgggtatcttcacctactcacatgaggagaacacgcacgccttcagc
ctggaagacaacgtgccggaagaggtgaagcaggagcgcgccgataccatcatggaattg
cagcagggcatctctatggagttgaacgaagccaaagtgggcaacacctataaagtgctg
tttgaccgcaaggaaagcggctattatgtgggccgtacccagtatgactcgccggaagtg
gacaatgaagtattggtgccagcagacagcgcctatgtgcgtctgggagacttcgctaac
gtgaaaatcaccgattcttctgactttgacctgtacggcgaagtagtaggaagcgcgcag
gaatctgcaatgcacatttctacggtagatgccatttcagaataa
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