KEGG   Nitrosarchaeum sp. AC2: DSQ20_03985
Entry
DSQ20_03985       CDS       T06694                                 
Name
(GenBank) DNA-directed RNA polymerase subunit K
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
nic  Nitrosarchaeum sp. AC2
Pathway
nic03020  RNA polymerase
nic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DSQ20_03985
  09124 Replication and repair
   03420 Nucleotide excision repair
    DSQ20_03985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nic03021]
    DSQ20_03985
   03400 DNA repair and recombination proteins [BR:nic03400]
    DSQ20_03985
Transcription machinery [BR:nic03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DSQ20_03985
  RNA polymerase III system
   RNA polymerase III
     DSQ20_03985
  RNA polymerase I system
   RNA polymerase I
     DSQ20_03985
DNA repair and recombination proteins [BR:nic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DSQ20_03985
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF5344 Med9
Other DBs
NCBI-ProteinID: QLH10723
UniProt: A0A7D5MAQ5
LinkDB
Position
complement(695136..695669)
AA seq 177 aa
MREFGYLSDSNEAELIVEEPEEYVEAPEVEEVFEGDVEINTGLNKALDTYRKLIEKNEGL
EPLTEKQQEALEKRIKEIESREVVETISEHDPVEIPCEKGKITIGPPTLTRFEKARIMGA
RALQLSLGAPPFIPIPKTARISLDISMEELEQKVIPITIRRVLPNGDYQNIPIEYFD
NT seq 534 nt   +upstreamnt  +downstreamnt
ttgagagaatttgggtacttgtcggattctaacgaagctgaattaattgtagaagaacca
gaagaatatgtagaagctcctgaagtagaggaagtttttgaaggagatgtagagataaac
acgggattaaacaaagcattagatacttatcgaaaattaattgaaaaaaatgaagggtta
gaaccattaactgaaaaacaacaagaggcactagaaaaaagaattaaagaaattgaatca
cgagaagttgttgaaacaatttcagaacatgatccagtagagatcccatgtgaaaaaggc
aagataacaattggtcctccaacactaacaagatttgaaaaggcaagaattatgggcgca
agagcattacagttatcattaggagcacctccattcattccaattccaaaaactgccaga
atatcactagatatatccatggaagaattagaacaaaaagtgataccaatcactataaga
agagtactccctaatggagattatcaaaacataccaatagaatactttgattaa

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