Nitrosopumilus piranensis: NPIRD3C_0876
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Entry
NPIRD3C_0876 CDS
T03656
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NPIRD3C_0876 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nid03021
]
NPIRD3C_0876 (rpoE)
Enzymes [BR:
nid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NPIRD3C_0876 (rpoE)
Transcription machinery [BR:
nid03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NPIRD3C_0876 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
S1_2
BPL_C
Motif
Other DBs
NCBI-ProteinID:
AJM92088
UniProt:
A0A0C5BQT2
LinkDB
All DBs
Position
complement(747566..748150)
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AA seq
194 aa
AA seq
DB search
MFSISTLVDVVRIPPSLFGTTLKKAAVNILKEKYESMINADLGYIIMILDAKVDEMGKMI
AGDGGTFHRVQFEALTFYPKLQEIVQGEIVDITDFGAFVRIGPTDALLHLSQVMDDYLKS
DVKSGMILANQSGRTLKVGSTLRARITAVSLGKAAAMGKIGITCRQPFLGADEWIEEEIK
KSSGEAEEAKVEAS
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttgttttctatatctaccctagttgacgttgtgaggattcctccaagcttgtttggaact
acactcaaaaaggcagcagtgaatattctcaaagaaaagtacgagagtatgattaatgca
gatttaggttacatcattatgattttagatgctaaagttgatgaaatgggaaagatgatt
gcaggtgatggtggaacattccacagagttcaatttgaagcattgacattttatccaaag
ttacaagaaattgtgcaaggagaaattgtagatattacagactttggggcatttgtaaga
attggtcctactgatgcattacttcacttatcacaagtgatggatgattatcttaagagt
gatgtaaaatcaggaatgattttagctaatcaaagtggtagaacattaaaagttggttca
acacttcgtgcaagaattactgcggtatcattaggtaaggcagctgcaatgggaaagatt
ggaatcacatgccgacagccattccttggtgcagatgaatggattgaagaagagattaag
aaatcttctggtgaagcagaagaagctaaagtagaggcaagttaa
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