Nitrosopumilus piranensis: NPIRD3C_1685
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Entry
NPIRD3C_1685 CDS
T03656
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
nid
Nitrosopumilus piranensis
Pathway
nid00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NPIRD3C_1685 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nid01007
]
NPIRD3C_1685 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nid03016
]
NPIRD3C_1685 (lysS)
Enzymes [BR:
nid01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NPIRD3C_1685 (lysS)
Amino acid related enzymes [BR:
nid01007
]
Aminoacyl-tRNA synthetase
Class I (A)
NPIRD3C_1685 (lysS)
Transfer RNA biogenesis [BR:
nid03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NPIRD3C_1685 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJM92897
UniProt:
A0A0C5CCI3
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All DBs
Position
1334800..1336389
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AA seq
529 aa
AA seq
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MSEQEIIGKGTWIDKLASELLEREKSLGRNLELLKVESGLGASGIPHIGSLGDAVRAYGV
KLALENLGYKSELIAYSDDLDGLRKIPEGMQEFGLEEHLAKPVSLIPDPYGCHDSYGMHM
SSILLDGLDKVGIKYKFRRAIDTYKQGLLKNNIHTILQNSTKIGEKISELVGQEKYQKYL
PYFPVCASCNRLYTAEATEYIADEKKVKYHCHDAEIGSKMIKGCGHEGEADIAKDLGKLA
WKVEFAARWSAFDIRFEAYGKDIMDSVKVNDWVADEILDFPHPHHVKYEMFLDKGGKKIS
KSLGNVLTAQRWLKFGSSKSILLLLYKRITGARELGLEDIPSLMNEYNELEDINFGRIKI
DNQAKLVKSKGLYEYVNLLNPPKQPSTHVNYRLLIELAKIFKENRNERVMKKLIDYGVIK
NPEPEIEKLIELAGNYSDEFDEQEKMQIELDGTAKKALKILAETLGAEDEPEDIQNTIYQ
IAKSNDVQPKDFFKILYQIILGTSRGPKIGPFISDIGRKQVAEKLLEYT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaagaaattatcggaaagggtacttggattgacaaattagcttccgaatta
cttgaaagggaaaaatcacttggaagaaatttagaacttcttaaagtagaaagtggtcta
ggagcatcaggaattccgcatattggaagtttgggcgatgcagtaagagcttatggagta
aagctagctttagagaatttaggttacaaatcagaattaattgcatattcagatgatctt
gacggattgcgaaaaatcccagaaggaatgcaagagtttggtttggaagaacatctagca
aaaccagtatcactcattccagatccatatggatgccatgattcatacggcatgcacatg
agcagtattcttttagatggactagacaaagttggaattaaatacaaatttagaagagca
attgacacatacaaacaaggattactaaaaaacaacatccacaccattttacaaaacagc
acaaagatcggagaaaaaatttcagagttagtaggacaagagaaatatcaaaagtacctg
ccatattttccagtatgtgcaagctgtaatcgactctacacagcagaagcaacagagtat
atagcagatgaaaagaaagtcaagtatcattgtcatgatgctgaaataggctcaaaaatg
atcaaaggatgtgggcatgaaggagaagcagacattgcaaaagatcttggaaaacttgcc
tggaaggtagaatttgcagcaagatggtcagcatttgatattagatttgaggcgtatgga
aaagacatcatggattctgttaaagtaaatgattgggtagcagatgagattttagatttc
ccacacccacatcacgtaaaatatgaaatgttcttagacaaaggcggaaaaaagatttca
aaatcattaggaaatgtgttgactgcacaaagatggttaaagtttggcagttcaaaatca
attctattgttactttacaaaagaatcacaggggctagagagttgggattagaagacata
ccatctctgatgaatgaatacaatgaattagaagacatcaattttggaagaattaagata
gataatcaagcaaaacttgtaaagtcaaaaggactctacgaatatgttaatctattaaat
cccccaaaacagccaagtacacatgttaactatagactattaattgaattagcaaaaatt
ttcaaagaaaatagaaatgaaagggtgatgaaaaagttaattgactatggggtaataaaa
aacccagaaccagaaattgaaaaactcattgaacttgcaggaaattactctgatgagttt
gatgaacaagaaaaaatgcaaattgaactagatggcactgcaaaaaaagcattaaaaatt
ttagcagaaactcttggagcagaggatgaaccagaagacattcaaaatacaatttaccaa
attgcaaaatcaaatgatgtacaaccaaaagatttctttaaaatattatatcagataatt
cttggaacctccagaggaccaaaaattggtccatttatctcagatattggaagaaaacaa
gtagcagagaaacttttagagtacacgtaa
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