Nitrincola iocasae: F5I99_15410
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Entry
F5I99_15410 CDS
T06212
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
nik
Nitrincola iocasae
Pathway
nik00071
Fatty acid degradation
nik00280
Valine, leucine and isoleucine degradation
nik00310
Lysine degradation
nik00362
Benzoate degradation
nik00380
Tryptophan metabolism
nik00410
beta-Alanine metabolism
nik00640
Propanoate metabolism
nik00650
Butanoate metabolism
nik00907
Pinene, camphor and geraniol degradation
nik00930
Caprolactam degradation
nik01100
Metabolic pathways
nik01110
Biosynthesis of secondary metabolites
nik01120
Microbial metabolism in diverse environments
nik01200
Carbon metabolism
nik01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
F5I99_15410 (fadB)
00650 Butanoate metabolism
F5I99_15410 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
F5I99_15410 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
F5I99_15410 (fadB)
00310 Lysine degradation
F5I99_15410 (fadB)
00380 Tryptophan metabolism
F5I99_15410 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
F5I99_15410 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
F5I99_15410 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F5I99_15410 (fadB)
00930 Caprolactam degradation
F5I99_15410 (fadB)
Enzymes [BR:
nik01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
F5I99_15410 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
F5I99_15410 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
F5I99_15410 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
F5I99_15410 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QEW07769
UniProt:
A0A5J6LGP2
LinkDB
All DBs
Position
complement(3345577..3347727)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQGKAITARQIDGGFVEVVFDLQGDSVNKFNQLTLNELREAVDAIRALTDVKGVMFSS
AKDCFIVGADITEFSQMFDQSEESIVEHLLSLHEIFNAIEDLPCPTVTAINGIALGGGFE
LCLSTDFRVMGDKAKVGLPEVKLGIYPGWGGTVRLPRLIGVDNANEWICGGAEKRAAEAL
KDGAVDAVVATEAVRDAALDLLTKAADGVFDYQARRTEKTTAIKLNQIEQMMAFESAKGF
IGAKAGPHYPAPMAALSSIQKSANMTRDKAIQVEAKGFAKLATNSVTKALVGLFLKDQYV
KKVSKAFEKDTTPVKLAAVLGAGIMGGGVAYQSASKGVPILMKDINDKALQLGLDEATKL
LNGQVKRGRMDAQKMAKVLTQITPTLSYGDFGRVDLVVEAVVENAKIKASVLAEVEQQVS
DDTIITSNTSTISITALAKSLQRPENFCGMHFFNPVHRMPLVEVIRGEQSSEAAIARTVA
YAKSMGKTPIVVNDCPGFLVNRVLFPYFAGFSLLLRDGADFTRVDKVMEKFGWPMGPAYL
LDVVGIDTGHHADAVMAEGFPDRMGHDGENAIDRMYQLERYGQKNDKGFYRYELDRRGKQ
VKLIDESVPALLEGIVGTARDFSDEEIIARMMIPLCIETVRCLEDGIVATPAEADMGLIY
GIGFPPFRGGALHYLDQMGLQAFLEMAAPFADLGPLYQPTARMQQMAANGETYFGE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaggtaaagcgattacggcgcgccagattgatggcggcttcgttgaggtc
gtgtttgatttgcagggcgatagtgtcaataagttcaatcaattgacactgaatgagctg
cgtgaggctgttgatgccattcgcgccttaaccgacgtaaaaggggttatgttcagcagt
gccaaagactgctttatcgtcggtgcggacatcactgaattcagccagatgtttgatcag
tcggaagagagcattgttgagcatctgctgtcattacatgaaattttcaatgccattgaa
gacctgccctgcccgacagtaacggccatcaatggtattgcactgggcggtggttttgag
ctttgcctgtctaccgatttccgggtgatgggtgacaaggctaaggtcggcttgccggaa
gtgaagctgggcatctacccgggttggggtggcaccgtacgcttgccacgtctgatcggt
gtggataatgccaatgagtggatctgtggtggtgcggaaaagcgcgctgcagaagcactg
aaagacggtgctgttgatgcggttgtagccacagaggctgtgcgtgacgctgcattggat
ctgctgactaaagcggcagatggtgtatttgactatcaggcgcggcgtaccgaaaagacc
acggcgatcaagctgaatcagattgagcagatgatggcgttcgagtcagccaagggcttt
atcggtgccaaagccggtccacattatccggcgcctatggcggcactgagctcgattcag
aaaagcgccaatatgacccgcgataaagccattcaggtggaagccaaaggctttgccaag
ctggctactaatagcgtgaccaaagccttggtgggtctgttcctcaaagatcaatacgtt
aaaaaagtcagcaaagcctttgaaaaagacaccactccggtgaaactggccgcggtgctg
ggtgccgggattatgggcggcggtgtcgcctaccagtcggcctccaagggtgtaccgatc
ctgatgaaggatatcaatgacaaagccctgcagttgggtcttgatgaagccaccaaactg
ctgaatggtcaggttaaacgtggccgcatggatgcacagaagatggccaaagtgctgaca
cagattaccccgaccctgagttatggtgactttggtcgtgtcgatctggtggttgaggct
gttgtggaaaatgccaaaatcaaagcgtcggttctggctgaagtggagcagcaggtcagt
gatgacacgattatcacttccaatacctcgaccatctcaatcactgcactggcgaaatca
ctgcagcgcccggaaaacttctgtggcatgcattttttcaacccggtgcaccgcatgccg
ctggtcgaagtcattcgtggtgagcaaagctctgaagcggcgatcgcccgtaccgtggcc
tatgccaaatccatgggtaaaaccccgatcgtggtgaatgactgcccgggattcctggtt
aaccgggtactcttcccttactttgccggtttcagtctgctgttgcgtgatggcgccgat
tttacccgcgtagataaagtgatggaaaaattcggttggcctatggggccagcgtatctg
ctggacgtagtgggtatcgataccggtcatcatgccgatgcggttatggccgaaggcttc
ccggatcgcatggggcatgacggtgaaaatgccatagatcgcatgtatcaactggagcgc
tatggtcagaaaaatgacaagggcttttaccgctacgagctggaccgtcgcggcaagcag
gtcaagctgattgatgaatcggttccggcgctgctggaagggattgttggtacagcgcgt
gactttagcgatgaagagattatcgcccggatgatgattcctctgtgtatcgaaacagtt
cgctgtcttgaagatggcatagtggccaccccggctgaggccgatatgggtctgatttat
ggcatcggcttcccgccgttccgtggcggtgccttgcactacctggatcagatgggcttg
caggctttcctggagatggccgcgccttttgcggacttgggcccgctgtaccagccaacc
gcacgtatgcagcagatggctgcgaacggcgaaacctatttcggcgaataa
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