KEGG   Nitrosopumilus adriaticus: NADRNF5_1063
Entry
NADRNF5_1063      CDS       T03758                                 
Name
(GenBank) RNA polymerase Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
nin  Nitrosopumilus adriaticus
Pathway
nin03020  RNA polymerase
nin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NADRNF5_1063
  09124 Replication and repair
   03420 Nucleotide excision repair
    NADRNF5_1063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nin03021]
    NADRNF5_1063
   03400 DNA repair and recombination proteins [BR:nin03400]
    NADRNF5_1063
Transcription machinery [BR:nin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NADRNF5_1063
  RNA polymerase III system
   RNA polymerase III
     NADRNF5_1063
  RNA polymerase I system
   RNA polymerase I
     NADRNF5_1063
DNA repair and recombination proteins [BR:nin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NADRNF5_1063
SSDB
Motif
Pfam: RNA_pol_Rpb6 YqzH
Other DBs
NCBI-ProteinID: AJW70753
UniProt: A0A0D5C2F6
LinkDB
Position
complement(874903..875445)
AA seq 180 aa
MIRLYNVLRKFCYLSDVKEAPLVDVPQTEEVVETLEDIPESNAGLNKALDTYRKLIEKKG
GLEPLSEKDQESLEKRIKEIENREVVEKVEEHEPEEIPCEKGKITIGPPTLTRFEKARIM
GARALQLSLGAPPFIPIPKTARISLDIAMEELEQRVIPITIRRVLPNGDFQNIPIDYFEK
NT seq 543 nt   +upstreamnt  +downstreamnt
atgattagattatataacgttttaagaaaattttgttacttgtctgatgttaaagaagcc
ccattggtagatgtgcctcaaactgaagaagttgtagaaacgctagaagacataccagaa
tcaaatgccggactaaacaaagcactagatacttatcgaaaattaatagagaaaaaagga
ggcttagaaccattaagtgaaaaagatcaagagagccttgaaaaaagaatcaaagagatt
gaaaacagagaagttgttgaaaaagttgaagaacatgaaccagaagaaattccttgtgag
aaaggaaaaattacaattggacctccaacacttacaagatttgaaaaagcaagaattatg
ggtgcaagagctttacaactatcattaggtgcaccaccattcattccgattccaaaaact
gcaagaatttcattagatattgcaatggaggagctagaacaaagagtgatcccaattaca
attagaagggtccttccaaacggagattttcaaaatataccaattgattactttgaaaaa
tga

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