KEGG   Nitrosopumilus sp. K4: NsoK4_03160
Entry
NsoK4_03160       CDS       T07707                                 
Name
(GenBank) DNA-directed RNA polymerase subunit K
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
nip  Nitrosopumilus sp. K4
Pathway
nip03020  RNA polymerase
nip03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NsoK4_03160
  09124 Replication and repair
   03420 Nucleotide excision repair
    NsoK4_03160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nip03021]
    NsoK4_03160
   03400 DNA repair and recombination proteins [BR:nip03400]
    NsoK4_03160
Transcription machinery [BR:nip03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NsoK4_03160
  RNA polymerase III system
   RNA polymerase III
     NsoK4_03160
  RNA polymerase I system
   RNA polymerase I
     NsoK4_03160
DNA repair and recombination proteins [BR:nip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NsoK4_03160
SSDB
Motif
Pfam: RNA_pol_Rpb6 YqzH
Other DBs
NCBI-ProteinID: QUC65267
UniProt: A0A8B2HRI5
LinkDB
Position
complement(542820..543338)
AA seq 172 aa
MRTFWYLSDANETELVEPVEETTDIEAGEVEPEVNAGLNKALDTYRKLIEKKDGKEPLSE
KEQENLEKRIKEIESREVVETIEEHEPIEIPCEKGKITIGPPTLTRFEKARIMGARALQL
SQGAPPFIPIPKTARISLDIAMEELEQRVIPITIRRVLPNGDFQNIPIDYFD
NT seq 519 nt   +upstreamnt  +downstreamnt
ttgagaacgttttggtacttgtctgatgcaaacgaaactgagttagtagagcctgttgaa
gagaccacagatatcgaagcaggagaggttgaaccagaagtaaatgctggattaaacaag
gcactggacacatatagaaaattaattgagaaaaaagacggtaaagaaccactaagtgag
aaagaacaagagaatcttgagaagagaattaaagaaattgaaagtagagaagttgtagaa
accatcgaagaacatgaaccaattgaaatcccatgtgaaaaaggaaaaatcacaatagga
ccaccaacattaacacgatttgaaaaagcaagaattatgggtgcaagggcactgcagcta
tcacaaggagcaccaccatttattccaattccaaaaactgcaagaatctcactagacatc
gcaatggaagagcttgaacaaagagtgatcccaatcacaattagaagagtattgccaaat
ggcgattttcaaaacatcccaatagattattttgattaa

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