Nitrosopumilus sp. K4: NsoK4_05400
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Entry
NsoK4_05400 CDS
T07707
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
nip
Nitrosopumilus sp. K4
Pathway
nip00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nip00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NsoK4_05400 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nip01007
]
NsoK4_05400 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nip03016
]
NsoK4_05400 (lysS)
Enzymes [BR:
nip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NsoK4_05400 (lysS)
Amino acid related enzymes [BR:
nip01007
]
Aminoacyl-tRNA synthetase
Class I (A)
NsoK4_05400 (lysS)
Transfer RNA biogenesis [BR:
nip03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NsoK4_05400 (lysS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
PolyA_pol_RNAbd
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
QUC63900
UniProt:
A0A8B2HL80
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All DBs
Position
900451..902037
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AA seq
528 aa
AA seq
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MEQQEVIGKGTWIDKLAFELLEREKSLGRKLDLLRVESGLGASGVPHIGSLGDAVRAYGV
KLALENLGYKSELIAYSDDLDGLRKIPEGFPESLEEHLAKPVSLIPDPFGCHDSYGMHMS
SILLDGLDRTGIKYEFRRAIDTYKKGLLKDQIHTILQNSTKIGDKISELVGQEKYQKFLP
YFPVCANCSKLYTAESFEYLENEKKVRYKCHDAEIGGKMIKGCGHDGEADIGKDLGKLAW
KVEFAARWAAFDIRFEAYGKDIMDSVKVNDWVADEILNYPHPHHVKYEMFLDKGGKKISK
SLGNVLTAQKWLEFGDPKSILLLLYKRITGARELGFEDIPSLMNEYNELEDIFFGKLKVD
NQAKLTKSKGLYEYVNLLDIPKQASTHVNYRLLVELAKIFKEDRKERVMKKLIDYGVIKN
PEPKVEKLIELAGNFADEFDQQEKAEIELDDNAKKALKILSETLGADNEPEDIQNTIYQI
AKSNDVQPKDFFKILYQIILGTSRGPKIGPFISDIGRKQVAKTLAEYI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaggaagtaatcggtaaaggtacatggatagacaagttagcatttgaatta
ctagaacgtgaaaaatcacttggaagaaaattagatttgcttagagtagaaagtggatta
ggagcatcaggggttccacatataggaagtttaggcgatgcagtcagagcatacggggtt
aaacttgcattagaaaatttaggatacaaatcagagttaattgcatattctgatgacctt
gacggattaagaaaaattcccgagggatttccagagtcattagaggaacatcttgcaaag
ccagtatcattaatcccagatccatttggttgtcatgattcatacggaatgcatatgagc
agcattcttttggatgggcttgacagaacagggataaaatacgaatttagaagagcaata
gacacatacaaaaaaggactcctaaaggatcaaattcacacaattttacaaaacagtaca
aagatcggagataagatttcagaattggtaggacaagaaaaatatcaaaaatttctgcca
tattttccagtatgtgcaaactgcagcaaattatacactgcagaatcatttgagtatctt
gagaacgaaaaaaaggtcagatacaagtgtcatgatgcagaaattggaggaaaaatgatc
aaagggtgtggccatgatggagaagcagacattggaaaagatttaggaaaattagcatgg
aaagttgaatttgcggcaagatgggcagcatttgacataagatttgaagcttatggaaaa
gacataatggattcagtaaaagtaaatgactgggtagcagatgaaattttaaactatcca
catccacaccacgtaaaatatgagatgtttttagacaaaggcggaaagaagatttcaaaa
tcactgggaaacgtactaactgcacaaaaatggctagagttcggagacccaaaatcaatc
ttactattactttacaaaagaattacgggtgcaagagagcttggatttgaagatattcca
tcattaatgaacgaatataatgaattggaagatatattctttggaaaattaaaggtagac
aaccaagcaaaattaacaaaatcaaaaggactgtatgaatatgtcaatctattagatatc
ccaaaacaggccagcacccatgtcaactataggctcttagtagaacttgcaaagatcttc
aaagaagacagaaaagaaagagtaatgaaaaagctaattgattacggagtaattaaaaac
ccagaaccaaaggtagagaaactcatcgaacttgcaggaaactttgcagacgagtttgac
cagcaagagaaagcagaaattgaattagatgacaatgccaaaaaagcactgaaaatactt
tcagaaacacttggggcagataacgagccagaagacattcaaaacacgatttaccaaatt
gcaaaatcaaatgatgttcaaccaaaagatttcttcaagatattataccaaataattcta
ggaacatcacgaggtccaaagataggaccgttcatttcagatattggcagaaaacaagtt
gcaaaaactcttgcagaatatatctaa
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