Nymphalis io (European peacock): 126776193
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Entry
126776193 CDS
T08495
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126776193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niq03019
]
126776193
Enzymes [BR:
niq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
126776193
Messenger RNA biogenesis [BR:
niq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
126776193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
MMR_HSR1
AAA_16
RsgA_GTPase
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
126776193
NCBI-ProteinID:
XP_050354451
EnsemblRapid:
ENSIIOG00005012675
LinkDB
All DBs
Position
19:1478125..1482559
Genome browser
AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLEPDSELRFEVESKNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAV
FTWHGCTVELRGRTEVSYIAKETPMVVYLNVHAALEQQRVAAEQENTRGPVTMVVGPGDV
GKSTLTRILLNYAVRMGRRPIFVELDVGQGHISVPGTVGALLVERPASIEEGFSQQAPLV
YHFGHKSPGENLELYNTIVSRLAEVIAERCENNKKASTSGVIINTCGWVKGAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERSSTQRAEARDARIREYF
YGKRTPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLGMRAEDALTKLVSVWPAPALAHRL
LAVSFAAGPDDHVLHCNLAGFVCVTAVDPERQTLTILSPQPRPLPATVLLLSDLQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagttcaactacaagaatttaaattagaacctgactcggaattacgttttgaa
gtagaatctaaaaacgaaaaagttgttttagaggttaaaagcggttatgccgagttgttt
ggcacggagctagttaaaggaaagccttatgagttccatactggtgctaaagtggcagtg
ttcacgtggcatgggtgcacggtcgagctccgaggtcgcactgaagttagttatatcgct
aaggaaactcccatggtagtctatctgaatgttcatgcagcactggaacagcagagagtt
gcagcagaacaggagaatacaagaggccctgtcaccatggtggtggggccaggtgatgta
ggcaagtcgacattaactaggatactactaaattatgcagtaagaatgggaagacgtcca
atatttgtggaattagatgtcggccaaggtcacattagtgtccctggaactgtaggtgcc
ttgttagtcgagaggccggcatctatagaagaaggcttcagtcagcaagcacctcttgtt
tatcactttggtcataaatcacctggagagaatctggaactgtataacacgattgtgtca
agactagcagaggtgattgctgaacgatgtgaaaataataagaaagcgtcaacgtcaggt
gtaataataaacacttgcggttgggtgaaaggagcgggatataaggttttgacacatgcc
gcacaggcattcgaggtggatgtaattttagtattagataacgaaaggctgtacaatgag
ctgaagagggatatgccgaaatttgtcaaagttgtttacttaccaaaaagtggaggggta
gtagagagatcgtctacccagcgagctgaggccagggatgctcggatacgggagtatttc
tatggaaagcgaacaccatactacccacattcgtttgacgtcaagttctccgacttgaag
atatataaggtgggcgcgccgtcgctgcccgactcgtgcatgccgctgggcatgcgcgcg
gaggacgcgctgaccaagctggtgagcgtgtggcccgcgcccgcgctggcgcaccgcctg
ctcgccgtgtccttcgccgccgggcccgacgaccacgtgctgcactgcaacctcgccggc
ttcgtgtgcgttacggcggtggatcccgagcggcagacgctgaccatcctgtcgccgcag
ccgcgcccgctgccggcgacggtgctgctgctgtctgacctgcagtacatggacaaccac
tag
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