Candidatus Nitrosopumilus sediminis: NSED_02225
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Entry
NSED_02225 CDS
T02303
Name
(GenBank) RNA polymerase insert
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NSED_02225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nir03021
]
NSED_02225
Enzymes [BR:
nir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NSED_02225
Transcription machinery [BR:
nir03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NSED_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AFS82255
UniProt:
K0BB81
LinkDB
All DBs
Position
complement(376409..377047)
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AA seq
212 aa
AA seq
DB search
MSSLEVISKDNQKIAVKLSGIPLQYANALRRVCLNGVPVFAIDTVDIIENSSVLPDEGLA
HRLGLIPLTTDLSRFNEPSKCECQSETGCSNCRVMLVLDSGDSDVTRTVLSNELSSEDDS
IKPTSDKIPIVQLAPGQRIKIECYARLGRGTEHAKWNSATISTLTDTEKEDVKVLTVEST
GALKPEQIIISGVDEVSNRIGQFKEMIDQVEE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatccttagaggtaattagtaaagataatcaaaagattgcagtaaaacttagtggc
atcccattacaatacgcaaatgcacttagacgagtatgccttaatggagttccagtattt
gcaattgacacagtagacattattgaaaattcctcagtattgccagatgaaggtttggct
cacagattaggacttattccattaacaacagatttgagtagatttaatgaaccatcaaaa
tgtgaatgccaaagtgaaacaggctgttctaactgtagagtaatgttagttttagattca
ggagattcagatgtcacaagaacggtactatcaaacgaattgtcatcagaagatgattcg
attaaaccaacttcagataagattcccatagtccaactagcaccaggccaaagaatcaaa
atagaatgctatgcaagattaggacgtggaacagaacatgccaaatggaattctgcaaca
atatcaacacttacagataccgaaaaagaagatgtcaaagtactaacagtggaatcaaca
ggagcactcaaacctgaacaaattatcatttcaggagtagacgaggtcagcaatagaata
ggtcaatttaaagagatgattgaccaagttgaagaataa
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