Candidatus Nitrosopumilus sediminis: NSED_03040
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Entry
NSED_03040 CDS
T02303
Symbol
lysK
Name
(GenBank) lysyl-tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NSED_03040 (lysK)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nir01007
]
NSED_03040 (lysK)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nir03016
]
NSED_03040 (lysK)
Enzymes [BR:
nir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NSED_03040 (lysK)
Amino acid related enzymes [BR:
nir01007
]
Aminoacyl-tRNA synthetase
Class I (A)
NSED_03040 (lysK)
Transfer RNA biogenesis [BR:
nir03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NSED_03040 (lysK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
tRNA-synt_1g
PolyA_pol_RNAbd
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
AFS82414
UniProt:
K0BAB5
LinkDB
All DBs
Position
complement(498373..499962)
Genome browser
AA seq
529 aa
AA seq
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MTEQDIIGKGTWIDKLASELLEREKTLGRNTDLLRVESGLGASGIPHIGSLGDAVRAYGV
KLALENLGYKSELIAYSDDLDGLRKIPEGMQEFGLEEHIAKPVSLIPDPYGCHDSYGMHM
SSILLEGLDKVGIKYEFRRAVDTYKQGSLKEQIHTILQNSAKIGEKISELVGQEKYQKYL
PYFPVCANCNRLYTAEATEYVADEKKVKYTCHDTEIGSKLVKGCGHIGEADIGKDLGKLA
WKVEFAARWAAFDIRFEAYGKDIMDSVKVNDWVADEILKFPHPHHVKYEMFLDKGGKKIS
KSLGNVITAQKWLEFGSPKSILLLLYKRITGARELGFDDIPSLMAEYNELEDIYFGRIKV
DNQAKLTKSKGLYEYVNLLNPPKQSSTHVNYRLVIELAKIFKENRGQRVMKKLLDYGVIK
NPEPEIEKLIELAGNYADEFDEQEKIQIDLDDTSKKALKLLVDELGGDKELEDIQNTIYQ
IAKSNDIQPKDFFKILYQIILGTSRGPKIGPFISDIGRKQVAKTLSEYT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcaagacattatcggtaaaggaacttggattgataagttagcatcagaatta
cttgaacgtgaaaaaactcttggaagaaatacagatttactaagagtagaaagtggtctt
ggggcatctggaattccacatataggaagtttaggtgatgcagttagggcatacggagta
aaactagcattagaaaacctaggatacaaatcagaattaattgcgtattcagatgatctt
gacggattaagaaaaattccagaaggcatgcaagagtttggtttagaagaacacattgca
aaaccagtgtcactaataccagatccttatggttgtcatgactcgtacggaatgcatatg
agcagtattctattagaaggattagataaagttggaataaaatatgaatttagaagagca
gttgacacttacaaacaaggatcactaaaagagcaaatccatacaatattacaaaacagt
gcaaaaataggagagaaaatttcagaactagtaggacaagaaaaatatcagaaatatttg
ccatattttccagtatgtgcaaattgtaatcgactctatacagcagaagctacagagtat
gtcgcagatgaaaagaaagtaaaatacacatgccacgacaccgaaattggctcaaagcta
gtcaagggatgtgggcatataggagaagcagacattggaaaagaccttgggaaattagcc
tggaaagtagaatttgcagcaagatgggcagcatttgacattagatttgaagcatatggg
aaagacatcatggattcagtcaaagtcaatgactgggtggcagatgaaattctgaaattt
ccacatccacatcatgtaaaatatgaaatgtttcttgataaaggaggaaaaaagatttca
aaatcattaggcaatgtaatcactgcacagaaatggttagaatttggcagtccaaaatca
attttgctattattatacaaaagaattacaggtgcaagagaattaggatttgatgacatt
ccatctttaatggcagagtataatgaacttgaagatatttactttggacgaatcaaagta
gacaaccaagcaaaactgacaaaatcaaaaggactctacgaatatgtgaatctcctaaac
cctccaaaacaatcaagcactcatgtaaactatagacttgtaatcgaattagcaaaaatc
ttcaaagaaaacagaggacaaagagtaatgaaaaaattactagattacggagtaattaaa
aatccagagccagaaatagaaaaactcatcgagcttgcaggaaattatgcagatgaattt
gacgaacaagaaaaaatccaaattgatttagatgatacgtcaaagaaggcattgaaatta
ttagttgatgaattgggaggagataaagaacttgaagatattcaaaatacaatatatcaa
atcgcaaaatcaaatgatattcaaccaaaagatttctttaaaatattatatcagataata
cttggaacttcaagaggacccaaaatagggccatttatttcagatataggaagaaagcaa
gtagcaaagacactttcagagtatacataa
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