Candidatus Nitrosopumilus sediminis: NSED_05130
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Entry
NSED_05130 CDS
T02303
Name
(GenBank) tryptophan synthase subunit alpha
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00260
Glycine, serine and threonine metabolism
nir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NSED_05130
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
NSED_05130
Enzymes [BR:
nir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
NSED_05130
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
DHO_dh
FMN_dh
IMPDH
BtpA
PcrB
NanE
ThiG
IGPS
TMP-TENI
NMO
Radical_SAM
G3P_antiterm
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
AFS82830
UniProt:
K0BCT6
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All DBs
Position
840723..841523
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AA seq
266 aa
AA seq
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MSRIKEKFSELQARNQKALISYIMAGFPNEKATISTIRGLVKGGVDIIEIGFPFSDPLAD
GPVIQNASTVSLEKGTKIAKFFNLVKKIRKETDIPLILMTYTNILYHKGYAKFIVEAKRA
GIDGFILPDMSIEESKEYLKAAKNNADTIFLISPNTSKTRIQKISKVTSGFLYLVAVFGT
TGIKTGIKKYTIDAIKQVKKQTKGKIPVGVGFGVSTPDDVKKYIKAGADAVIVGSAYLKL
IEKTPQNQLESKIASFTKSLKKQTIL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaattaaagaaaagttttcagagttacaggctagaaaccaaaaagctctgata
tcatacattatggcagggtttccaaacgagaaagcaaccatatccaccattagaggattg
gtcaagggaggagtagatatcatagagattggatttccattttcagatcctctagctgac
ggaccagtcattcagaatgcaagtacagtatccctagaaaaaggaacaaagattgcaaag
tttttcaatcttgtaaaaaaaataagaaaagaaacagacatcccccttattctaatgaca
tataccaatattttgtaccataaaggatacgcaaaattcattgtagaagcaaaaagagca
ggtatcgatggttttattcttccagacatgtcaatagaagagtcaaaagaatacttgaag
gcagcaaagaataacgcagatacaatattcttaatttctccaaatacaagcaaaacaaga
attcagaaaatatctaaggtaacatcagggtttttgtatctggttgcagtatttggcact
acaggaataaaaacaggaattaaaaaatatacaatagatgcaatcaagcaagtcaaaaaa
cagaccaagggaaaaattccagtaggggtcggatttggagtttcaacaccagatgacgta
aaaaaatacatcaaagcaggggcagatgccgtaattgtcggaagtgcatatttgaaattg
attgaaaagaccccacaaaatcaactagagtcaaaaattgcatcatttacaaaaagtctc
aaaaaacaaacaatcctttag
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