KEGG   Candidatus Nitrosotenuis sp. DW1: DSQ19_05495
Entry
DSQ19_05495       CDS       T07741                                 
Name
(GenBank) DNA-directed RNA polymerase subunit K
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
niu  Candidatus Nitrosotenuis sp. DW1
Pathway
niu03020  RNA polymerase
niu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:niu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DSQ19_05495
  09124 Replication and repair
   03420 Nucleotide excision repair
    DSQ19_05495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:niu03021]
    DSQ19_05495
   03400 DNA repair and recombination proteins [BR:niu03400]
    DSQ19_05495
Transcription machinery [BR:niu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DSQ19_05495
  RNA polymerase III system
   RNA polymerase III
     DSQ19_05495
  RNA polymerase I system
   RNA polymerase I
     DSQ19_05495
DNA repair and recombination proteins [BR:niu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DSQ19_05495
SSDB
Motif
Pfam: RNA_pol_Rpb6 Turandot
Other DBs
NCBI-ProteinID: QLH09965
UniProt: A0A7D5M985
LinkDB
Position
941438..941836
AA seq 132 aa
MEDAVAAYKKIFETKELTDDERVELDKKVKEMEQREIVDTDPVHDAIEIPLAGKGKIAIG
PPTLTRFEKARILGARALQLSLGAPPFITIPANARTSLDIALKELEDRVIPIVIRRKLPN
GDYQNIPIDFFN
NT seq 399 nt   +upstreamnt  +downstreamnt
atggaagacgcagttgcagcatacaaaaaaatcttcgagaccaaagaactaacagacgac
gagcgagttgagctagacaaaaaggtaaaggagatggagcagcgagaaatagttgacaca
gatccagttcacgatgctatagaaattccacttgcaggaaaaggcaagatagcaatcggc
ccaccaacgctaacaagatttgaaaaggcaagaattctaggcgcacgagcactacaattg
tcattgggagcaccaccattcataacaatcccagcaaatgccagaacatcacttgacata
gcactaaaagaactcgaagatcgagtaattccaattgttattagaagaaagctgccaaac
ggcgattaccaaaacattccaattgactttttcaattaa

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