Candidatus Nitrosopumilus sp. SW: Nisw_01970
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Entry
Nisw_01970 CDS
T06175
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Nisw_01970 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
niw01007
]
Nisw_01970 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niw03016
]
Nisw_01970 (lysS)
Enzymes [BR:
niw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Nisw_01970 (lysS)
Amino acid related enzymes [BR:
niw01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Nisw_01970 (lysS)
Transfer RNA biogenesis [BR:
niw03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Nisw_01970 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QDI88386
UniProt:
A0A514L945
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All DBs
Position
318004..319593
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AA seq
529 aa
AA seq
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MSEQEIIGKGTWIDKLASELLEREKSLGRNLDLLRVESGLGASGIPHIGSLGDAVRAYGV
KLALENLGYKSELIAYSDDLDGLRKIPEGMQEFGLEEHLAKPVSLIPDPYGCHDSYGMHM
SSILLDGLDKVGIKYEFRRAVDTYKQGLLKDNIHTILQNSAKIGDKISDLVGQEKYQKYL
PYFPVCANCNRLYTAEATEYIADERKVKYRCHDAEIGSQMIKGCGHEGEADIGKDLGKLA
WKVEFAARWAAFDIRFEAYGKDIMDSVKVNDWVADEILDFPHPHHVKYEMFLDKGGKKIS
KSLGNVLTAQRWLEFGSPKSILLLLYKRITGARELGVEDIPSLMNEYNELEDINFGKIKI
DNQAKLVKSKGLYEYVNLLNPPKQASTHVNYRLLIELAKIFKENRNERVMKKLLDYGVIK
NPEPEIEKLIELAGNFSDEFDEQEKIQVDLDETTKKALKILSEALGAEEEPEDIQNTIYQ
IAKSNNMQPKDFFKTLYQIILGTSRGPKIGPFISDIGRKQVAKTLSEYT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaagaaattattggtaaaggaacttggattgacaagttagcttcagaatta
cttgagcgtgaaaaatcacttggaagaaatttagatcttcttagagtagaaagtggtctg
ggtgcatcaggaataccacacattggaagcttaggagatgcagtaagagcatacggagta
aaattagcattagagaatctaggttacaaatcagaacttattgcttattcagatgattta
gacggattgcgaaaaattccagaaggaatgcaagagtttggattagaagagcatttggca
aaaccagtgtcattaattccagacccatacggatgccatgactcatacggaatgcacatg
agcagtattcttttagacggccttgacaaggttggaataaaatatgaatttcgaagagca
gttgacacttacaaacaaggattactcaaagataacattcacaccattttgcaaaacagt
gccaagattggagacaaaatatcagatctagtaggacaagaaaaatatcaaaaatatctc
ccatactttccagtttgtgctaactgtaatcgcctctacacagcagaggcaacagaatac
attgcagacgaaaggaaggtcaaatacagatgtcatgatgcagagattggctcacaaatg
atcaagggttgtggtcacgaaggggaggccgatattggaaaagaccttggaaagttagca
tggaaagtagaatttgctgcaagatgggcagcatttgacattagatttgaagcatatgga
aaagacatcatggattctgtaaaagtaaatgattgggtagcagatgaaattttagatttc
ccacaccctcaccatgtaaaatatgagatgttcctagataagggaggaaaaaagatttca
aaatcattgggaaatgtactaactgcacagagatggttagaatttggcagtccaaaatca
attctattattactttacaaaagaattactggcgcacgtgaacttggtgtagaagacata
ccatctttgatgaatgagtacaacgaattagaagatattaactttggaaaaatcaaaata
gataatcaagcaaaacttgtaaaatcaaaaggactatacgaatacgttaatctcctaaac
cctccaaaacaagcaagtactcatgtaaactatagactattaattgaactagcaaaaata
ttcaaagaaaatagaaatgaaagagtaatgaaaaaacttctcgattatggggtaataaaa
aatccagagccagaaatagagaaacttattgagcttgcagggaatttttcagacgaattc
gatgagcaagaaaaaatacaagttgatttagatgaaacaacaaaaaaagcactaaagatt
ttatcagaagcacttggcgcagaagaagaaccagaagatattcaaaatacaatctatcaa
attgcaaaatcaaataatatgcaaccaaaagatttctttaagacattataccaaattatt
cttggtacatctagaggaccaaagataggaccattcatttcagacataggcagaaaacaa
gtagcaaaaacactatcagagtatacgtaa
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