Nitrospira japonica: NSJP_2183
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Entry
NSJP_2183 CDS
T05001
Symbol
cfiB
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01959
pyruvate carboxylase subunit A [EC:
6.4.1.1
]
Organism
nja
Nitrospira japonica
Pathway
nja00020
Citrate cycle (TCA cycle)
nja00620
Pyruvate metabolism
nja01100
Metabolic pathways
nja01120
Microbial metabolism in diverse environments
nja01200
Carbon metabolism
nja01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NSJP_2183 (cfiB)
00620 Pyruvate metabolism
NSJP_2183 (cfiB)
Enzymes [BR:
nja01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
NSJP_2183 (cfiB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_ST
ATP-grasp_3
GARS_A
RimK
DUF4634
Motif
Other DBs
NCBI-ProteinID:
SLM48355
UniProt:
A0A1W1I5U5
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Position
I:complement(2065471..2066895)
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AA seq
474 aa
AA seq
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MKMFRKILVANRGEIAMRIIRACRELNIATAAIYSEADSTGIYVKKANEAYLVGPGPVKG
FLDSRQIVELAQRIGADAIHPGYGFLSENAQFAELCDASGITFIGPSPLAITTMGSKVKA
RELAHKIGVPIVPGTEGGITDVKEGLAFAKQTGYPVIIKANAGGGGRGLRVVRSDAELRE
NMEVAAREALASFGDGSVFIEKYIERPHHIEFQILADRHGNIIHLGERDCSIQRRHQKLI
EIAPSLVLTPKLRTEMGKAATAIARAVNYDNAGTVEFLLDQDGRFYFIEMNPRLQVEHTV
TEQITAIDIVRNQIAIAAGKPLDIQQKDVILQGHAIQCRINAEDPKNNFMPCTGIVTDYL
SPGGIGVRIDGAVYKDYTVPPYYDALLAKLTVRGRTWEETVSRMRRSLEEYVLRGVKTTI
PFMKAIMQDQDFLAGRFDTSYLDTHPDLYTYDEIEQPEDLVLALAAAIAAYEGL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtttcggaagattttggtggccaatcgaggtgaaatcgccatgcgcatcatt
cgcgcatgccgcgagttgaatatcgccaccgccgccatctattcggaggccgactccacc
ggaatctacgtcaagaaagccaatgaggcctatctcgtgggtcccggtccggtcaaaggt
tttctcgacagtcgccagatcgtcgagttggcccaacgcatcggggccgacgctatccat
ccaggatacggatttctctctgaaaacgcgcagttcgccgagctgtgcgacgcatcaggc
attacgttcatcggtccgtcccccctggccattacgaccatgggcagcaaggtcaaggcc
cgtgaactggcccacaagatcggcgtgcccatcgtcccgggaacagagggtggaattacg
gacgtcaaagaaggactcgccttcgccaaacagaccgggtatccggtcatcatcaaagcc
aacgccggcggtggcggccggggcctccgcgtcgtgcgatccgacgccgaactccgcgaa
aatatggaagtcgctgcgcgagaagccctggcttcattcggcgacggcagtgtgttcatc
gaaaaatacatcgagcggccccatcatatcgagtttcaaatcctggccgaccgccacggc
aacatcatccatctgggcgagcgcgactgctccattcagcgccgtcatcagaaattgatc
gagatcgcgccgtccctcgtcctgactcccaagctgcggaccgagatggggaaagccgcc
accgcgatcgcccgagcggtcaactacgacaatgccggaacggtggagtttctgctcgac
caggacggccgcttctacttcatcgaaatgaatccccgccttcaggtcgagcatacggtc
acggagcagatcaccgcgatcgacatcgtccgcaatcagatcgccatcgccgcgggcaag
ccgctcgacattcaacagaaggacgtcattctccaggggcatgccattcaatgccgcatc
aacgccgaggatccgaagaataatttcatgccctgcaccggaatcgtgacggattacctg
tcgccgggaggaatcggggtccggatcgacggcgccgtctataaagactacaccgttccg
ccctattacgacgccctgctcgccaaactcaccgtgcggggccggacctgggaagagacc
gtgagccgtatgcggcgatcgctcgaggaatatgtgttgcgtggcgtcaagacgaccatt
cccttcatgaaagcgatcatgcaggatcaggattttctcgccggtcggttcgatacctcc
tatctcgacacgcatccggacttgtacacctacgacgaaatcgagcagccggaagatctc
gttctggcgctcgccgccgccattgcggcctatgaagggctgtaa
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