Nitrospira japonica: NSJP_3188
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Entry
NSJP_3188 CDS
T05001
Name
(GenBank) putative tRNA modifying enzyme, MiaB-like
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
nja
Nitrospira japonica
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nja03016
]
NSJP_3188
Enzymes [BR:
nja01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
NSJP_3188
Transfer RNA biogenesis [BR:
nja03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NSJP_3188
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
SLM49355
UniProt:
A0A1W1I8P0
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All DBs
Position
I:complement(3052674..3054023)
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AA seq
449 aa
AA seq
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MKRASLHTLGCRLNQAETSVLESQLRKEGYELVAFGQPTDLLVVNTCSVTKEAERTCRYV
VRKTLKHSPEAFVAVTGCYAQTGWQELRSMAGVDLIVGNQFKWDLPAMLPATEHLRKAPK
PEVVHSKTIDRDDFILPDYGTPHSTRASVKIQDGCNVMCSFCLIPFARGHERSRVLEDAI
REATLLAAAGYREIVLTGVNIGRYQQDGRDLLALIDALERIDGLERIRISSIEPTTIDDG
LIERMAASSKLCPYLHVPLQSGDDTILSAMNRPYRVKDFAKLIERVVRAVPSLGLGTDVM
VGFPGESEGAFLNTVRLAETLPFSYLHVFPFSPRPGTAALRMNGSVAPGLVRDRATRLAA
LDRAKRMWFAERHIGSTLPILFEAGETDGFASGTAPNFLRVAVAASDYLTSTTRSVRISA
ASERWAVGQVLPARHESKAPQTLSLVSIS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagcatccctgcatacgttgggctgtcgactgaatcaggcggaaacctccgtg
ctcgaatcccaattgcgcaaggaaggttacgaactcgtggccttcggtcaaccgaccgat
ttgttggtggtgaacacctgctcggttacgaaggaagcggaacgtacctgccgttacgtc
gtgcggaagacccttaaacattcgcccgaggcgtttgtcgccgtgaccggttgttacgcc
cagaccggctggcaggaactgcgctcgatggcgggcgtcgacctgatcgtcggcaatcaa
tttaaatgggatcttccggcgatgcttcccgccaccgagcacctgcgaaaagctcccaag
cccgaggtggtgcacagcaagacgatcgaccgggatgatttcatccttcccgattacggg
accccccattcgacgagggcatccgtaaagatccaggacggatgcaacgtgatgtgcagc
ttttgtctcatcccgtttgcccgcggacatgagcgaagccgcgtgttggaagacgcgatc
cgggaggcgactctgctcgcggcggcaggataccgcgagatcgtactaaccggcgtgaac
atcggccggtaccaacaggacggcagggatctgcttgcgcttatcgacgcgctggaacgg
atcgatgggttggagcggatcaggatctcttctatcgaaccgacgacgattgatgacggg
ctgatcgagcgaatggccgcttcctcgaagctctgtccctatctgcacgtcccgctgcag
agcggggacgacaccatcttgtcggccatgaaccgtccctatcgcgtgaaggacttcgca
aagctgatcgaacgagtggttcgggcggttccatcgctcggattaggcacggacgtgatg
gtcggatttcccggagaatccgagggggcgtttcttaataccgtccgcttggcggaaacc
ctccccttttcctatcttcacgtgtttccgttctccccgagacccggcacggccgccctg
cgaatgaacggatccgtcgctccgggattggttcgcgaccgcgcaacgagactggcggcg
ctggatcgtgccaagcggatgtggtttgcggaacgtcatatcggatcgactcttcccatt
ctttttgaagcgggagaaaccgacggctttgcctcgggcacggcgccgaattttctgcgc
gtcgcggtggcggcttccgactacctgaccagcaccactcggtccgtccgcatctcggcc
gcgtccgagcgatgggccgtcggacaagtcctacctgcccgacatgagtccaaggccccg
caaaccttgtctttggtatcgatctcatga
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