Candidatus Nitrospira kreftii: Nkreftii_000801
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Entry
Nkreftii_000801 CDS
T08052
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf03030
DNA replication
nkf03410
Base excision repair
nkf03420
Nucleotide excision repair
nkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nkreftii_000801
03410 Base excision repair
Nkreftii_000801
03420 Nucleotide excision repair
Nkreftii_000801
03440 Homologous recombination
Nkreftii_000801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nkf03032
]
Nkreftii_000801
03400 DNA repair and recombination proteins [BR:
nkf03400
]
Nkreftii_000801
Enzymes [BR:
nkf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nkreftii_000801
DNA replication proteins [BR:
nkf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Nkreftii_000801
DNA repair and recombination proteins [BR:
nkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Nkreftii_000801
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nkreftii_000801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
TrkA_C
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
QPD03027
UniProt:
A0A7S8FBZ4
LinkDB
All DBs
Position
complement(752437..755094)
Genome browser
AA seq
885 aa
AA seq
DB search
MPDSTNAKKILYLIDGSAYIYRAFFALPALNNSKGLQTNAVYGFMTTLLKIIREHKPDGL
AVAFDEKGPTARHAEFKEYKAQRPPMPDGMKGQIPYIHRAVQALNIPAVKQVGYEADDLI
GTLARQAEQAGYDVVIVTGDKDMLQLLTPQVRIYDPVKDKWSGVQECVAKFGVEPGRVVE
VMGLMGDTSDNIPGVKGIGEKTAIKLIAQFGTIEELLRRLDEVTPARIKALLTEQAENAR
LSRKLATIDIESPVEFHPESYRIKPPHDDQLTDLLRELEFTSLLKSLQSSPKQQELKTQD
ITTIEDEAAAQRFVDSLPKDTPLGLHCLLAGQPGIHTDVLGIGVSTGEHTAFIPIDVHTF
MRPIMPLLHDTHRTKVVHDLKATLLAFHRIGITLAPPYLDTMIGDYLLNPNRRDHGLETI
ALERLGKRLGSGTHEKAQPQSLFEIDTGSREAAAEAATTLAKLEPILRGQLVEQGSSKLF
ADVEMPLVPILAEIERNGFLLDVEGLHELSQELERELDRMLESITRSAGEAFNINSPKQL
ATVLFDKLGLKPLRKTKTGYSTDEDTLTQLATQHELPAQILNYRSLSKLKSTYVDALPEL
VRPETKRLHTSLNQTVAATGRLSSTDPNLQNIPVKGDYGLRIREAFIVPKGHELLCADYS
QIEPRILAHLSQDPRLLSVFSKGEDIHMATAMEIFSLPSSQITRDMRRAAKTVVFGIVYG
ISPFGLSQNLGVPQPEAKKYIDTFFERFSAVRALMDQNIAEGRERGYTTTILGRRRPIPE
LQSGDPAQRGFGERMAVNSPIQGSAADLIKVAMINVHKKLHEELPHVKMILQVHDELIFE
VPDHDLEEAKRLVKQEMEDVGKQLGLSVPLKVDLGVGKNWRVAHP
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcaacgaacgcgaagaagatactctacctgattgacggcagcgcctacatc
tatcgcgcctttttcgccctgccggcgttgaacaattcaaaaggtctccagaccaacgcg
gtctatggattcatgaccaccctgctgaaaatcatccgcgagcacaagccagacggtctt
gcggtcgccttcgatgagaaagggccgaccgcccgacacgcggaattcaaagagtataag
gcacagcggccgccgatgccggacggcatgaaaggacagatcccatacattcatcgggca
gtgcaggcgctgaacattcccgccgtcaagcaggtcggatatgaagcggacgatctgatc
ggcacgttggccagacaggcagagcaagccgggtacgacgtcgtgattgtcacaggcgac
aaagacatgttgcagttactgaccccacaggtgcgcatctacgacccggtgaaggacaag
tggtcgggggttcaagaatgtgtggcgaagttcggggtcgagccggggcgggtggtggag
gtcatgggactcatgggagataccagcgacaacattcccggagtcaaaggcatcggtgaa
aaaaccgcaatcaaactcatcgcgcagttcgggacgatcgaagaactactacgccgcctc
gacgaggtcacccccgcccgcatcaaagccctcctcaccgaacaggcggagaatgcgcgt
ctcagccggaaactggcgaccatcgatatagagagccctgtggaatttcatcccgagtct
tatcggatcaagccaccgcacgacgaccaattgactgacttactccgcgagttggaattc
acctccctcctcaagagccttcagtcatcgccgaaacagcaggaattgaagactcaagat
atcaccactatcgaagacgaagcagcggcgcaacgattcgtcgacagtttgccgaaggac
acgcccctcggcctgcactgtctgttagccggccaaccaggtatccataccgacgtgctc
ggtataggcgtctccaccggtgagcacacggctttcattccgatcgacgtgcatacattc
atgcggccgatcatgccgcttctgcacgacacgcacaggacaaaagtcgtgcacgacctc
aaggccaccctgctggccttccatcgaatcggtatcactttggctccaccatatctggac
acgatgatcggggactatttgctcaatccgaaccgccgggaccatggcctcgaaacgatt
gcgttggaacggttaggcaaacggcttggctcgggaacgcatgagaaggcacaaccccag
tcgctcttcgaaattgacactggttcgcgagaagctgcagcggaggctgccaccaccctg
gccaagctcgagccgatcctgagaggccagttagttgagcaaggaagctcaaaactgttt
gccgatgttgagatgccgctcgtccctatcctcgccgagatcgaacgaaatgggttcctg
ttggatgtcgaagggctccacgaactgagtcaggaactcgagcgggaacttgaccgcatg
ctggaaagcatcactcgttcggcaggcgaagcgttcaatatcaactcgccgaaacagttg
gcgactgttttattcgacaaactcggattgaagccactgcgcaagaccaagaccggctat
tccaccgacgaagacacgttgacacagctcgcaacgcaacacgagctaccggcccagatt
ctcaactaccgaagcctcagcaaactcaaatcgacctacgtggatgcactccctgaattg
gtgcgaccggagacgaaacggctccatacttcattgaaccagaccgtcgccgccaccgga
cggctctcgtccaccgatccaaatctccaaaatattcccgtcaaaggcgattacgggctg
cgtattcgcgaagcatttatcgttcctaaaggccatgaactcctctgcgccgactacagc
cagatcgagccgcgcatcctcgcccatctctcgcaagatccgcgcttgctctccgtcttt
tccaaaggcgaggacatccacatggcgacggccatggagattttcagcctgccgtcaagt
cagatcacgagggacatgcgccgcgccgccaaaaccgtcgtcttcggtattgtgtacggc
atcagtccgttcggactctcgcaaaacttaggcgtacctcaaccagaagcgaagaaatac
atcgacaccttctttgagcgattctcagctgtccgggccctcatggatcagaacatcgcc
gaaggacgagaaaggggctacaccacgaccatcctcggccgacgtcgtcctattcctgag
ttacaaagtggcgatccggcccaacgtggcttcggcgaacgtatggcggtcaacagcccc
atccaaggctcggcagccgacttgattaaagtcgctatgatcaatgtccataaaaaactc
cacgaggagctgccgcatgtgaagatgatcctccaagtccatgacgaactcatctttgag
gtgccggatcatgacttggaggaagcgaagcgactggtgaaacaagagatggaagatgtc
ggaaaacaattgggcttatcggtgccgcttaaagtggacttaggcgtcggcaaaaactgg
cgggtggcacatccttaa
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