Nitrosospira lacus: EBAPG3_013160
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Entry
EBAPG3_013160 CDS
T04907
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nlc03009
]
EBAPG3_013160
Enzymes [BR:
nlc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EBAPG3_013160
Ribosome biogenesis [BR:
nlc03009
]
Prokaryotic type
ribosomal protein modification factors
EBAPG3_013160
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
ARO88642
UniProt:
A0A1W6SS63
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All DBs
Position
2888928..2890265
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AA seq
445 aa
AA seq
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MPSPKPLSPKVGFVSLGCPKALVDSEQILTQLRAEGYDISSTYEDADLVVINTCGFIDSA
VEESLDAIGEALAENGKVIVTGCLGAKGDGEVVKQAHPQVLAVTGPHALPEVMAAIHMHL
PQPHDPYTSLIPPQGIRLTPRHYAYVKISEGCNHRCTFCIIPSMRGDLVSRPVNQVMQEA
ENLVNAGVKELLIISQDTSAYGVDVKYRTGFWQGRPLKTRMTELVRALGEFGVWVRLHYV
YPYPHVDEVIPLMAERKILPYLDVPFQHASPRILKAMKRPASSENNLARIRQWREVCPDI
TLRSTFIVGFPGETEAEFEELLEFLREAQLDRVGCFAYSPVEGATANALPDHIPEEIKKE
RHARFMAAQEEISTARLTRKIGKRMTVLVDEIQKNKAIARSSADAPEIDGVVYIDHAKTM
KPGEFIEVEITGSDAHDLFAKSVTG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcccaaacccttatctcccaaagtcggttttgtctcgctcggttgccccaag
gcgctggtggattccgagcaaattctcactcagcttcgtgccgaaggttatgacatctca
tccacctacgaggacgcggacctggtggtgatcaacacctgcggcttcatcgacagcgcg
gtggaagaatcattggatgctatcggcgaggcactggcggagaacggcaaagtcatcgtc
accgggtgcctcggcgccaaaggcgacggcgaggtggtcaaacaagctcatccacaggtc
ctggctgtcaccggcccgcatgcgttgccggaggtcatggcggcgatacacatgcatctg
cctcagccgcacgacccttataccagcctgatccctccgcagggaatacgtctcaccccc
aggcattatgcctatgtcaagatttcagaaggctgcaaccatcgttgcacattctgcatc
atcccctccatgcgtggtgatctggtcagccgtcccgttaatcaggtcatgcaggaggca
gagaatctggttaacgccggtgtcaaggagttgctcatcatttctcaggatacgagcgcc
tacggcgtcgacgtgaaatatcgcacggggttctggcaaggcaggccgctcaaaacccgc
atgacggagctggtgcgcgccctgggtgaattcggagtttgggttcgtctgcactacgtc
tacccctatcctcacgtggatgaagtcatcccgctgatggccgagcgaaaaattctgccc
tatctcgatgtaccgtttcagcatgccagtccacgtattttgaaagcaatgaaacgcccc
gccagttccgagaacaatctggcacgcatcaggcaatggcgcgaggtttgccccgacatt
acactgcgcagcactttcatcgtcggtttccccggtgaaacggaagcggaatttgaagag
cttctggaatttctgcgggaagcgcagctggaccgcgtcggctgcttcgcctattcgccg
gtggagggtgccactgcaaacgcgctgcccgatcacattcccgaagagataaagaaggaa
cgccacgcccgcttcatggcggcgcaggaagaaatcagcaccgcgcgacttacccggaaa
atcggcaaacgcatgactgtgctggtggatgaaattcagaaaaataaagccatcgctcgc
agcagcgccgacgcacccgagatcgacggcgtggtatacatcgatcacgcaaaaacaatg
aaacccggcgaatttatcgaggtcgaaattaccggttctgatgcgcatgatttatttgca
aaaagtgtgacgggttag
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