Nomascus leucogenys (northern white-cheeked gibbon): 100582385
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Entry
100582385 CDS
T03265
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100582385 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
100582385 (POLR1A)
Enzymes [BR:
nle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100582385 (POLR1A)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100582385 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
100582385
NCBI-ProteinID:
XP_030683389
Ensembl:
ENSNLEG00000002264
LinkDB
All DBs
Position
14:complement(69997413..70077070)
Genome browser
AA seq
1720 aa
AA seq
DB search
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENADPSACEIQEELEQYTTEIVQNNLLGSQGAH
VKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS
EPLGIEEAQTGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDDMESRFNPSVFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIQKLLALMAQEQKLPEEVAAPTT
DEEKDSLIAIDRSFLSILPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASVVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREQYMELVYRG
LTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHVPLNLSGKAKITGKAWVKET
PRSIPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPRAVRAALNLPEAASYD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALRHFRAIKKWQSKHP
NTLLRRGAFLSYSQKIQEAVKALNLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAA
ACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKW
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFRVYQLRFQ
FLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRSVNTRRATQRDLDNA
GESRRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN
DDEDMQEERNPHREGARKTQEQDEEVGSGAEEDPSLPALLTQPRKPTHSQEPQGPEAMER
RVQAVREIHSFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGIT
RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATLLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgatctccaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggctgaagagctcaagaaattaagtgttaaatccattacgaaccctcggtacctggac
agcctggggaacccatcggcaaacggcctgtacgatttagctttgggccctgcagattcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgttctgggcacctgggccac
attgagctcccactcacggtgtataatcctctcctcttcgataagctgtacctgctgctt
cggggctcttgtttaaactgccacatgctgacttgtccccgggccgtgattcacctctta
ctctgccagctgagggttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctggaagaaaatgccgatccctctgcctgtgaaattcaggaggaa
ttagaacaatacacaactgaaattgtgcagaacaatctcctggggtcccagggcgcacat
gtaaagaacgtgtgtgagagcaagagcaagctcattgctctcttctggaaggcacatatg
aatgctaagcgctgtccccactgcaagaccgggcgatccgttgtccgaaaggaacacaac
agcaagttgactatcacgtttccagccatggtgcacaggacagctggccagaaggactcg
gaacccctgggaattgaggaagctcagacgggaaaacgaggatacttaacacccaccagt
gcccgcgaacacctttctgccctgtggaagaatgaaggattctttctgaattaccttttt
tcgggaatggatgatgatgatatggagtccagattcaatcccagtgtgttctttctagat
ttcttggtggtgccgccctcaaggtatcgcccagtcagtcgcctaggagaccagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggatgtagttctgattcaaaaa
cttctggcattgatggcccaagaacagaagctgccagaggaagtggccgcacccactaca
gatgaggaaaaagactctttgattgctattgatcgatcctttttgagtatacttccaggc
cagtccctcatagacaaactttacaacatttggattcgccttcagagccacgtcaatatt
gtgtttgatagcgagatggacaaactaatgatggacaagtacccaggcattaggcagatc
ctggagaagaaagaaggcctgttccgaaaacacatgatgggaaagcgagtggactacgct
gcgcgctcagtcatctgcccagacatgtacatcaacaccaacgaaattggaattcccatg
gtgtttgccacaaaactgacctacccacagccagttaccccgtggaatgttcaggaactt
aggcaagcagtcatcaacggccccaatgtgcacccaggagcctccgtggtcatcaatgag
gacggcagccgcacagccctgagcgctgtggacatgacccagcgagaggccgtggccaag
cagctcctgaccccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacattctgctactgaaccgacagcccaccctgcacagaccctcc
atccaggcccaccgtgcccgcatcctgcctgaagagaaggtgctgcggctccactatgcc
aactgcaaggcctataatgccgactttgatggagacgagatgaatgcccatttcccccag
agtgagctgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccaaccattggcgggactgatccaggatcacatggtttcaggggcaagc
atgactactcggggttgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacggacaaagtggggcgcgtgaagctcctttctccttccatcctgaagccctttccg
ctgtggacaggaaaacaggttgtgtcaacgctgctcataaatataatcccagaggaccac
gtcccactgaatttatctggaaaggcaaaaatcaccgggaaagcctgggtgaaggaaact
cctcgatccattcctggctttaaccctgactcaatgtgcgagtcccaggtgatcatcagg
gaaggggagctgctctgcggagtgctggacaaggcgcactacgggagctctgcctacggc
ctggtccactgctgctatgagatctatggaggcgagaccagcggcaaggttctaacctgc
ttggcccgcctgttcactgcctacctgcagctctacagaggcttcacattgggcgtggaa
gacattttggtgaagccaaaggcagatgtcaagaggcaacgtatcattgaagaatccacc
cactgcgggccccgggctgtcagggctgcattaaacctgccagaagccgcatcatatgat
gaggtccgaggaaaatggcaggatgcccatctgggcaaggaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccttttggcctacacagacagttcccagagaacagcctgcagatgatggtgcagtca
ggagccaaaggttcaactgtgaacacgatgcagatctcgtgcctgctgggccagattgaa
ttggaaggtcggagacccccgctgatggcgtctggcaagtcactgccctgctttgagcct
tatgagttcacccccagggctggtggctttgtcactggcagattcctcaccggcatcaaa
cctcctgagttcttcttccactgcatggcaggacgagagggcctggtcgacactgctgtg
aaaaccagccgctcaggctatctccaaaggtgcatcatcaagcacctggagggactggtc
gtgcagtatgatctcacggtccgtgacagtgacggcagtgtggtgcagttcctgtatggg
gaggatggcctggacatccccaagacacaattcctgcagcccaagcagttccccttcctg
gccagcaactacgaggtgataatgaaatcacagcatctccatgaagttttatccagagca
gatcccaaaaaagctctccgccacttcagagctatcaaaaaatggcaaagcaagcacccc
aacaccctgctgagaagaggtgccttcttgagttattcccagaaaattcaggaagctgtg
aaagccctgaatcttgagagtgaaaaccgcaatggccgcagccccgggactcaggagatg
ctgaggatgtggtatgagttggatgaggagagccgaaggaaataccagaagaaggcagcc
gcttgtcctgaccccagtctgtctgtctggcgtcctgacatctactttgcatcagtgtca
gaaacatttgaaacaaaggttgatgactacagtcaagagtgggcagctcaaacagagaag
agttatgagaaatcagagctttctctcgacaggttgaggaccttgctgcagctgaagtgg
cagcgctcactgtgcgagccgggcgaggccgtgggcctgctggccgcccagagcatcgga
gagccctccacccagatgaccctcaacaccttccactttgcaggcagaggcgagatgaac
gtcaccctgggcattccaaggttgcgggagattctcatggtggccagtgccaacatcaag
acgcccatgatgagcgtgcctgtgctcaacaccaagaaagccctgaagagagtgaaaagc
ctcaagaagcagctcaccagggtgtgcttaggggaggtgttgcagaaaattgacgtccag
gagtccttctgtatggaagaaaaacagaacaaattccgggtgtaccagctgcggtttcag
ttcctgccacatgcatattaccagcaggagaagtgcctgagacccgaggacatcctgcgc
ttcatggaaacaagattctttaaacttctgatggaatccatcaaaaagaagaataataaa
gcatcagccttcaggagcgtaaatactcgaagagctactcagcgggatctggacaacgct
ggggagtcgaggaggagtcggggagagcaggagggtgatgaggaagaggaggggcacatt
gtggatgctgaagctgaggagggggacgccgatgcctctgatgccaaacgcaaggagaag
caggaggaggaggttgattatgagagtgaggaagaggaggagagggagggcgaggagaac
gacgatgaagacatgcaggaggaacgaaatccccacagggaaggtgctcgaaagacccaa
gagcaagatgaagaggtgggctcaggcgctgaggaggacccgtcccttcccgccctcctg
acgcagccccggaaacccacccacagccaggagccccaggggcccgaggccatggagcgc
cgggtccaggctgtgcgtgagatccactcgttcatagatgactaccagtatgacacggag
gagagcctgtggtgccaggtgacagtgaagctccctctgatgaagatcaactttgacatg
agctccctggtagtatctttggcccatggcgccgtcatctatgcgaccaagggcatcact
cggtgcctcctgaatgaaacaaccaacaataagaacgagaaggagcttgtgctaaacaca
gaaggaatcaacctcccagagctgttcaagtatgcagaggtcctggatctgcgccgcctc
tactccaacgacatccacgccatggccaacacgtacggcatcgaggccgcgctgcgggtg
atcgagaaggagatcaaggatgtgtttgccgtgtatggcatcgcggtcgaccctcgccat
ctctccctggttgctgattatatgtgctttgagggtgtctacaagccactgaatcgcttt
gggatccggtcaaactcttccccgctacagcagatgacgtttgaaaccagcttccagttt
ctgaagcaagccaccctgctgggatcccacgatgagctgaggtctccttctgcctgtctt
gtggttgggaaggttgtcaagggtgggacaggcctgttcgagctcaagcagcccctgaga
tag
DBGET
integrated database retrieval system
