Nomascus leucogenys (northern white-cheeked gibbon): 100584229
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Entry
100584229 CDS
T03265
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04064
NF-kappa B signaling pathway
nle04514
Cell adhesion molecules
nle04668
TNF signaling pathway
nle04670
Leukocyte transendothelial migration
nle04933
AGE-RAGE signaling pathway in diabetic complications
nle05143
African trypanosomiasis
nle05144
Malaria
nle05417
Lipid and atherosclerosis
nle05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100584229 (VCAM1)
04668 TNF signaling pathway
100584229 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100584229 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100584229 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100584229 (VCAM1)
05143 African trypanosomiasis
100584229 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100584229 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100584229 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100584229 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nle04090
]
100584229 (VCAM1)
04091 Lectins [BR:
nle04091
]
100584229 (VCAM1)
CD molecules [BR:
nle04090
]
Proteins
100584229 (VCAM1)
Lectins [BR:
nle04091
]
I-type lectins (Siglecs)
100584229 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
C2-set
Ig_2
V-set
C2-set_2
ICAM_N
Ig_5
Ig_4
Ig_6
ICAM1_3_5_D2
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
100584229
NCBI-ProteinID:
XP_003260166
Ensembl:
ENSNLEG00000011881
UniProt:
G1RMJ1
LinkDB
All DBs
Position
12:complement(74230833..74251229)
Genome browser
AA seq
739 aa
AA seq
DB search
MPGKMAVIFGASNILWIMFAASQAFKIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWR
TQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPE
IHFSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEV
TFTPVIEDIGKVLVCRAKLRIDGMDSVPAERQAVKELQVYISPKNTVISVNPSTKLQEGG
SVTMTCSSEGLPPPEIFWSKKLDNGNLQHLSGNATLTLIAMRMEDSGIYMCEGVNLIGKN
RKEVELIVQEKPFTVEISPGPRIAAQIGDSVMLTCSVMGCESPSFSWRTQIDSPLSGKVR
SEGTNSTLTLSPVSFENEHSYLCTVTCGHKKLEKGIQVELYSFPRDPEIEMSGDLIGGSP
VTVSCKVPSVYPLDRLEIELLKGETILKNIEFLEDTDMKSLENKSLEMTFIPTIEDTGKA
LVCQAKLHIDDMEFEPKQRQSTQTLYVNVAPRDTTILVSPSSILGEGSSVNMTCLSHGFP
APKILWSKQLPNGKLQPFSENATLTLISTKMEDSGVYLCEGINQAGRSRKEVELIIQVTP
KDIKLTAFPSESVKEGDTVIISCTCGNVPETWIILKKKAETGDTVLKSIDGAYTIQKAQL
KDAGVYECESKNKVGSQLRSLTLDVQGRENKKDYFSPGLLGLYFASSLIIPAIGMIIYFA
RKANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatggcggtgatctttggagcctcaaatatactttggataatgtttgca
gcttctcaagcttttaaaattgagaccaccccagaatctagatatcttgctcagattggt
gactccgtctcgttgacttgcagcaccacaggctgtgagtccccatttttctcttggaga
acccagatagatagtccactgaatgggaaggtgacgaatgaggggaccacgtctacgctg
acaatgaatcctgttagttttgggaacgaacactcttacctgtgcacagcaacttgtgaa
tctaggaaattggaaaaaggaatccaggtggagatctactcttttcctaaggatccagag
attcatttcagtggccctctggaggctgggaagccgatcacagtcaagtgttcggttgct
gatgtatacccatttgacaggctggagatagacttactgaaaggagatcatctcatgaag
agtcaggaatttctggaggatgcagacaggaagtccctggaaaccaagagtttggaagta
acttttactcctgtcattgaggatattggaaaagttcttgtttgccgagctaaattacgc
attgatggaatggattctgtgcccgcagaaaggcaggctgtaaaagaattgcaagtctac
atatcacccaagaatacagttatttctgtgaatccatccacaaagctgcaagaaggtggc
tctgtgaccatgacctgttccagtgagggtctaccacctccagagattttctggagtaag
aaattagataatgggaatctacagcatctttctgggaatgcaactctcactttaattgct
atgaggatggaagattctggaatttatatgtgtgaaggagttaatttgattggaaaaaac
agaaaagaggtggaattaattgttcaagagaaaccatttactgttgagatctcccctgga
ccccggattgctgctcagattggagactccgtcatgttgacatgtagtgtcatgggctgt
gagtccccatctttctcctggagaacccagatagacagccctctgagcggcaaggtgagg
agtgaggggaccaattccacgctgaccctgagccctgtgagttttgagaacgaacactct
tacctgtgcacagtgacttgtggacataagaaactggaaaagggaatccaggtggagctc
tactcattccctagagatccagaaatcgagatgagtggtgacctcattggtgggagcccc
gtcactgtaagctgcaaggttcctagcgtgtacccccttgaccggttggagattgaatta
cttaagggggagactattctgaagaatatagagtttttggaggatacggacatgaaatct
ctagagaacaaaagtttggaaatgaccttcatccctaccattgaagatacgggaaaagct
cttgtttgtcaggctaagttacatattgatgacatggaattcgaacccaaacaaaggcag
agtacacaaacactttatgtcaatgttgcccccagagatacaaccatcttggtcagccct
tcctccatcctgggggaaggcagttctgtgaatatgacatgcttgagccatggctttcct
gctccgaaaatcctgtggagcaagcagctccctaatggcaagctacagcctttttctgag
aatgcaactctcaccttaatttctacaaaaatggaagattctggggtttatttatgtgaa
ggaattaaccaggctggaagaagcagaaaggaagtggaattaattatccaagttactcca
aaagacataaaacttacagcttttccttctgagagtgtcaaagaaggagacactgtcatc
atctcttgtacatgtggaaatgttccagaaacatggataatcctgaagaaaaaagcagag
acaggagacacagtactaaaatctatagatggcgcctataccatccaaaaggcccagttg
aaagatgcaggagtatatgaatgtgaatctaaaaacaaagttggctcacaattaagaagt
ttaacactagatgttcaaggaagagaaaacaagaaagactatttttctcctgggcttctc
gggctctattttgcatcctccttaataatacctgccattggaatgataatttactttgca
agaaaagccaacatgaaggggtcatatagtcttgtagaagcacagaaatcaaaagtgtag
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