Neodiprion lecontei (redheaded pine sawfly): 107219377
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Entry
107219377 CDS
T09006
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nlo03016
]
107219377
Enzymes [BR:
nlo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
107219377
Transfer RNA biogenesis [BR:
nlo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107219377
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
TRAM_2
Motif
Other DBs
NCBI-GeneID:
107219377
NCBI-ProteinID:
XP_015513060
UniProt:
A0A6J0BDW0
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Position
5:complement(19947383..19950303)
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AA seq
545 aa
AA seq
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MSSPCSDIIDDIEDLISSQDITPKERYSTKKNVTVRAKRKKDIREAPEATILSSVIPGTQ
TIYVKTWGCTHNSSDSEYMAGQLAAYGYNLTEDKSQADLWLLNSCTVKNPAEDHFRNEIE
LGRCSGKHVVVAGCVPQGAPKTGFLSGLSVIGVQQIDRVVEVVEETLKGNSVRFLGQKKE
QGKKIGGASLALPKVRRNPLIEIIAINTGCLNQCTYCKTKHARGELGSYQPDEIIERAKQ
AFSEGVCELWLTSEDTGTYGRDIGSSLPELLWRLVEVVPEGCMMRIGMTNPPYILEHLEE
MGKILQHPRVYSFLHVPVQSGSDQVLADMKREYCCADFEQVVNFLQARVPGVTIATDIIC
GFPTETDNDFEDTMILCRKYKFPSLFINQFYPRPGTPAARMDKVPAQEVKKRTKKLSEFF
QSYEPYGHKVGQVQNVLVTEISHDKKHFVGHNKFYEQVLVPMRDGFMGKMVQVRIISATK
HSMKGQPLDEGISASIRTPLPKGIVSGIIEVAETKQSEPSKYRLFALIAIFLAVFARFLW
KLLNV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccctgcagtgacataatagacgacatcgaggacctgatatcatcccaggac
ataacgccgaaggagcgttacagcaccaagaaaaacgtgacagtgcgagccaagcgaaaa
aaagacatccgcgaagctccggaggctacaatcctgtccagcgtcattccaggcacgcaa
acaatctacgtgaagacctggggctgcacgcacaacagttcagatagcgaatacatggct
ggtcagctggcagcgtacggctataatttgacagaggacaaaagccaggctgatctgtgg
ttgttaaattcatgcacggtaaaaaacccagccgaagatcatttcaggaatgaaatcgag
ctcggcagatgcagcggcaagcacgttgtagtcgctggctgcgtgcctcagggtgcaccg
aaaacaggtttcctgtccggtctgagcgtaattggcgtccagcagatcgaccgggtggtc
gaggtggtcgaggagacgttgaaaggaaactcggttagatttctgggtcagaagaaagag
cagggaaagaaaatcggcggagcttcgctggccctgccgaaagtcaggcggaacccactg
atcgagatcatcgccataaacacaggctgcctgaaccagtgcacctactgtaaaacaaag
cacgcgagaggcgaattgggcagctatcaaccagacgagataattgagcgtgccaagcag
gccttttccgagggcgtctgtgaactctggcttacctctgaggacacagggacctacggc
cgtgatatcggctccagccttccagagctcctctggagactcgtggaagtcgtgcccgag
ggctgcatgatgcgcatcgggatgacaaaccccccctacatcctggagcaccttgaagag
atgggcaaaattcttcaacatcccagagtctacagttttctgcacgtccctgttcagtcg
ggcagcgatcaggtgctcgcagatatgaagagagagtattgctgcgctgactttgaacag
gttgttaatttcctgcaagcccgggtacctggcgtcaccattgccacggacataatatgc
ggttttcctaccgagacagacaacgactttgaagacaccatgatcctctgcagaaagtac
aagttcccaagtctgttcatcaaccagttttatcccaggcctggaactccggctgcaagg
atggacaaggttcctgctcaggaagtcaaaaagagaacgaaaaagttgtccgaatttttt
cagtcctacgaaccgtacggtcacaaagttggccaggttcaaaatgttctcgtcactgag
atttctcacgacaagaaacacttcgttgggcacaacaagttctatgaacaggttttggtg
cccatgagggatgggttcatgggtaagatggttcaggttcgaatcatatccgccaccaaa
cattctatgaaaggacagccgctcgatgaaggaatctctgcgtcgatcagaactccgctg
cccaaaggaattgtctccggtattattgaagttgccgaaaccaaacaatccgaaccatcc
aaatacagactgtttgctctcattgcaattttcttggcagtgttcgccagatttttatgg
aaacttttaaacgtttga
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