Neodiprion lecontei (redheaded pine sawfly): 107227629
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Entry
107227629 CDS
T09006
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107227629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlo03021
]
107227629
Enzymes [BR:
nlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107227629
Transcription machinery [BR:
nlo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107227629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4600
Motif
Other DBs
NCBI-GeneID:
107227629
NCBI-ProteinID:
XP_015524315
EnsemblRapid:
ENSNLCG00000014611
UniProt:
A0A6J0CD10
LinkDB
All DBs
Position
1:complement(9466358..9473147)
Genome browser
AA seq
1385 aa
AA seq
DB search
MVKELYRETAVARKISHVTFGIDNRHNMERQAHIHVVSKNLYSQDSHRSPVPYGVLDRKM
GTCSNQDSCTTCGKTLNECIGHFGYIDLELPVFHVGYFRSVINILQTICKKCSHVMLKET
EKKSYMVRVLNPNIGYLTRKALRKQILEKAKKNSTCPNCGDLNGTIKKAGLLKIVHEKYK
NKKTVDMAVKRRLAEYNNVLEENRELEGILQSGLLHVLNPIEVQGILERIPVSDVPLLLM
NPDCSLPKDLILTRIPVPPICIRPSVVSDVKAGTNEDNLTMKLSEIVFINDVIQKHRQSG
AKVQMYNEDWEFLQLHCALYVNSEMSGIPLNMQPKKSGRGLVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIEQVGVPIYVAKILTYPERVNASNIELMRKLVQNGPDVHPGANF
VQQRSTEFKKFLRYGNRLKISQELKYGDIVERHLRDDDVVLFNRQPSLHKLSIMAHKAKV
LEHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNKSNLVTPRNGELLIA
ATQDFITGGYLLTQKDTFLNKSQACQLASCLLAGDDASMNIDLPEPAIMKPVELWTGKQI
FSLILKPNKKCPIRANLKTKGRAYTSNEELCINDSFVIIRNSELLAGSMDKSTLGSGSKQ
NIFYVLLRDWGEDASTTAMWRLARVASYYLMNRGFSIGISDVTPGQGLLKAKHDLLTAGY
SKCTEYITQMESGRLICQPGCSEEESLEAMILKELSVIRDHAGKACLKELHPSNSPLVMA
LSGSKGSFINISQMIACVGQQAISGKRVPNGFEDRALPHFGRHSKVPAAKGFVENSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLHYDMTVRNSVGDIVQIL
YGGDGLDPTYMEGKDCPVDYKRVLDHTRAKSPYRDEQPLDGTSVISATTELLKSEDYSCL
SDEFKQELETFLKSVAHKINRLRHNATSKSSAVQQLERLTVSQLVEFMHTCKEKYMRAKI
EPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINANSNISTPIITA
ALENDTDPEFARRVKGRIEKTTLGEVTEYIEEVYLPDDCFLLIKLDVDRIKLLKLEVDAN
SIRYSICTSKLRLNPKLVNVRGDSIITVNPNKQKLNINYALMQLKETVPNVVIKGLPSVA
RAVIHNDDSTGKTRYRLFVEGDNMREVMATPGVLGKKTTSNNTMEVFKTLGIEAARATIM
TEIKLVMENHGMSIDRRHPMLVADLMTSRGEVLGITRHGLSKMKESVLNLASFEKTADHL
FDAAYYGQKDTISGVSESIIVGIPVPVGTGIFKLLHKAEDSKPERRQLIFDDPQYHKKIT
KPTTS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggaattgtacagggaaactgcggtggcccgcaaaatttcccatgtcacgttt
gggattgacaaccgtcataacatggagcggcaagcccatatccatgttgtctccaaaaat
ctctacagtcaggacagccatcgttcgccagtgccttatggtgttctcgatagaaaaatg
ggaacatgctccaatcaggacagctgtaccacatgtggtaaaacattgaacgaatgtatc
gggcactttggatacattgatttggaactgccagtatttcatgtgggatattttagatct
gtgataaacatccttcaaacaatatgcaagaaatgttcacacgtgatgctgaaagagaca
gagaaaaaaagttacatggtgcgtgtattgaatccaaatataggatacttgactcgtaaa
gcactgagaaaacaaatactggaaaaggcaaagaaaaattctacgtgtccaaattgtggg
gatttaaatggaacaattaaaaaagcagggttgttaaaaattgttcatgagaaatataag
aacaaaaaaacagttgatatggcggtgaaacgaagactggccgaatataacaatgtattg
gaagagaacagagaactagaagggattcttcaaagtggactgcttcatgtcttgaacccc
attgaggttcaaggtatcctggagcgtataccagtatcagatgtgcctcttctgctaatg
aatcctgactgttcgctaccaaaagatttaattttaacaagaattcccgtgcctccaatt
tgcattaggccgagcgttgtctccgacgtaaaggcaggcacaaatgaggataatttaaca
atgaaactgtcagaaattgtcttcattaatgacgttattcaaaaacatagacaaagcgga
gccaaggtgcagatgtataacgaagattgggaatttttgcagttgcattgcgctctttat
gtcaatagcgaaatgtccggtatcccactaaacatgcagccaaaaaagtctggtcgaggt
ttagttcagcgcctcaaaggaaaacaaggcagatttcgcggcaacttatctgggaaacgt
gttgatttttcgagcagaactgtgatttcgccagatcccaatttacgcattgaacaggta
ggagtaccgatttatgttgcaaaaatcttgacatatccagaaagggtgaatgcttctaac
atagaattaatgcgtaaattggtgcaaaatggtcctgacgttcacccaggagctaatttt
gtacaacaaagaagtacagaatttaaaaaatttttgcgctatggaaatagattgaagatt
tcccaggaactaaagtatggagacatcgttgagagacatctccgagacgacgatgttgtc
ttattcaatcgacaaccttcactacataagctcagtataatggctcataaagccaaagta
ttagaacaccgaaccttcagatttaacgaatgtgtctgcacgccttacaatgccgacttt
gatggtgatgaaatgaacctacatttaccacaaactgaggaagctagagccgaggcacta
gtattaatggggaacaaatcaaatttagtaacaccgcgaaatggcgagctgctgattgct
gctactcaggattttataactggtggatatcttttaacgcaaaaggatacattcctcaat
aaatcgcaagcttgtcaattggcgagttgtcttctggcgggagatgatgcatcaatgaac
attgatctgccagaaccagctattatgaaaccagtagaactgtggacgggtaaacagatt
tttagtttgatactaaagccgaataaaaaatgtccaattagagccaacttgaaaaccaag
ggcagagcatacactagtaacgaagagctgtgcattaatgattcgtttgtaataatccgt
aattctgaactcctcgctggatctatggacaagtctacgctaggttccggatctaagcaa
aatattttttacgttttattgagagactggggagaagacgcttcaacgacagctatgtgg
cgtttagctcgagttgcaagctactatcttatgaacagaggtttttcaattggaatcagc
gacgtcacacctggacaaggcctgctcaaagctaaacacgatcttcttactgctgggtat
tcgaagtgtactgaatacataactcaaatggaatctggaaggttgatttgtcagccaggt
tgttctgaagaagaaagtctggaggcaatgattttgaaagaattatctgttattcgtgat
cacgcaggaaaagcctgtttgaaggaactgcatccaagtaacagtccgttggtcatggct
ctctctggtagcaagggcagctttattaacatttcacaaatgattgcttgcgtcggacaa
caagctatcagtgggaaacgtgtaccaaacgggtttgaggatcgtgctctgccgcacttt
gggcgtcattccaaagttcccgcagccaaaggctttgtagaaaactcattctattctggt
cttactccaactgaattctttttccacacaatgggaggcagagaaggtctcgtagacaca
gctgtaaaaactgcagagacaggatatatgcaaagaagattggtcaaaagtttggaggat
ctttgcctccactatgatatgacggtcagaaattctgtcggagatattgtgcaaattttg
tatggcggagatggtttagatccaacgtacatggagggaaaggactgtccagtcgattat
aaaagagtcttggatcacacacgagcaaagtctccctacagagatgagcaacctttggat
ggaacaagtgtaattagtgctacaactgagctgttgaaatctgaggactactcatgcctg
agcgacgagtttaagcaagaactagaaacattcctgaagtccgtcgcgcacaagataaat
aggctgcgacacaatgctacgtcaaaatcctcagctgttcaacaattggaacgtctcacg
gtatctcaattggtggaatttatgcatacgtgcaaggaaaaatacatgagagcaaagatt
gaaccaggcacagcggttggagctcttgctgcacaaagtattggtgaaccaggcactcaa
atgacattaaaaactttccactttgctggtgtcgcctccatgaatattacacagggtgtt
cctcgtataaaagaaatcattaatgctaatagtaatatcagtacacctatcattaccgcc
gctttggaaaatgatacagatccagaatttgcaagacgagttaaaggtagaatagaaaaa
acaacattaggtgaagttacggaatacatcgaagaagtatatctgccagatgactgtttt
cttttaattaagttagatgtcgacaggataaaacttctgaaattggaagttgatgcaaat
tctattcgttactcaatttgcacatcgaaacttcgtctaaatccaaaactcgtcaatgta
agaggggattcaattattacagtgaatcctaacaagcagaaacttaacataaactatgct
ctcatgcaactcaaagaaactgttccaaacgttgtcataaagggtctgccgtctgttgcc
agagcagtaattcacaatgacgactccaccggaaagactagatacagattgttcgttgaa
ggtgataatatgcgcgaggtcatggccacgcctggggtcttggggaaaaaaactacatct
aataatacgatggaggtattcaaaacattgggaattgaggctgctcgagcaacgatcatg
acggagatcaaattagtaatggagaatcatggtatgagcatagacaggcgtcatcctatg
ttagtagctgatttaatgactagcagaggggaagttcttggcatcacccgtcatggtctt
tctaaaatgaaagagtctgtgctcaacttagcctcttttgagaaaacagcagaccatcta
tttgacgcagcttactacggacagaaggataccatctctggcgtatccgagtcaattatc
gttggtattccagtccctgttggcacaggaatcttcaagttacttcacaaagctgaggat
agtaaacctgaaaggaggcagctgatatttgatgacccgcaatatcacaagaagataacg
aaacctaccacgtcctag
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integrated database retrieval system
