Nilaparvata lugens (brown planthopper): 111045007
Help
Entry
111045007 CDS
T07276
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111045007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111045007
Enzymes [BR:
nlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111045007
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111045007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111045007
NCBI-ProteinID:
XP_022186002
LinkDB
All DBs
Position
2:complement(25077912..25133423)
Genome browser
AA seq
1386 aa
AA seq
DB search
MVKEQYRETDVARKISHVSFGLDGPHQMQQQAHLHVVAKNLYSQDSQRTPVPYGVLDRRM
GTNQKDANCATCGKGLSDCIGHFGYIDLELPVFHVGYFRCVINVLQTICKNPLCARVLLN
QKERLHYYQKIRNGKLSFLQQKALRKQIQEKAKKCFVCPECGDINGVVKKCGLLKIMHEK
YRNKKAEGVMKEKLAEYNEVCQYNAEIENNRKYGLSKVLNPQEVLRLLQAIPTTDVPLLL
MNAAISLPSDLLLTRIPVPPICIRPSVISDLKSGTNEDDLTMKLSEIVFINDVIMKHRLS
GAKAQMINEDWEFLQLHCALYINSETSGIPLNMQPKKSSRGLVQRLKGKQGRFRGNLSGK
RVDFSSRTVISPDPNLRIEQVGVPVHVAKILTFPERVHSANMALMKELIINGPDVHPGAN
FVEQKGSKLKTFLRYGNRMKVAQELKEGDIVERHLRDDDIVLFNRQPSLHKLSIMSHKAK
VLEHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEAHILMGNKSNLVTPRNGELLI
AATQDFITGSYLLTQKDTFLGKEEACQLVATLFAGEDVFLHVDLPPPAIRKPRVLWTGKQ
IFSMLLKPNKQCPIEANLRAKGRAYTSDEELCVKDSFVVIRNSELLAGTMDKSTLGSGGK
NNIFYVLLRDWSEEAATTVMWRLGRLESHYIMNRGFSIGIGDVTPGLGLLRAKNRLLHAG
YSKCNQYIEELASGQLQCQPGCSGEQTLEAVILKELSVIRDHAGKSCLKELRPSNSPLIM
ALSGSKGSFINISQMIACVGQQAISGKRVPDGFEDRALPHFERHTKIPAAKXFVEDSFYS
GLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLIKSLEDLCLNYDMTVRNSIGDIVQF
CYGGDGLDPTYMEGNGCPVELKRVWENIRARYPSRDEDALDPEEVLQSTIELFKSNDFDC
CSEEFRNQMKKFLESIAMKIALEREGRPNIPVVKELERVTLSQLINFCHVCCEKYMKAKI
EPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASKLISTPIITA
HLENDTDPEYARWVKGRIEKTTLGEVSEFIEEVYLPDDSFLLIKLDVERIRLLKLEVDAE
SIRFSMCTSKLRLKPNQVQVQSKSIITVKPISIKSSTDSQLQFLKENVPNVVIKGIPSVN
RAVIHEEERNGKKTYKLLVEGDNLREVIATYGVKGTQTWSNNTYQVYKTLGIEAARSTIM
TEIKVVMENHGMSIDHRHAMLVADLMTSRGEVLGITRHGLAKMKESVLNLASFEKTADHL
FDAAYHGQTDQVTGVSESIILGIPMSIGTGLFKLMHKMDRGDKLPKRTLLFDNAIYHKNT
APVPVA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaacagtatcgtgagacagatgtggcccgaaaaatatcgcatgtcagtttc
ggactggacgggccacatcagatgcagcagcaggctcacttgcatgtcgtcgccaagaat
ctctactcccaggacagccagcgcacccctgttccctatggagtccttgacaggcgcatg
ggaacgaatcagaaagatgcaaactgcgcaacttgtggaaaaggcttgagtgactgcatc
ggccatttcggctacatcgatttggagctgcctgtcttccatgtcggctacttcagatgt
gtgatcaatgtacttcagacaatctgcaagaaccctctatgtgctcgggtccttctgaat
cagaaagaaaggttgcactattaccagaaaatccggaatggaaagctgtcctttctgcag
cagaaagcgttgagaaagcaaattcaggaaaaggcgaaaaaatgcttcgtttgcccggag
tgtggagacatcaatggtgttgtcaagaaatgtggcttgctcaagatcatgcacgaaaag
tacagaaacaagaaggcggagggtgtcatgaaagagaaacttgcggaatacaacgaggtg
tgccagtacaacgcggagatcgagaacaaccggaagtatggcctgtcgaaagtgctgaac
ccgcaggaagtgttgcgcctgctgcaagccatccccaccaccgatgtgcccctcctcctc
atgaacgccgccatctccctcccctccgacctgctgctcacgcgcattcctgtgcctccc
atctgcattcggcccagtgtcatttccgacctcaaatctggcacgaacgaggatgatctg
acaatgaagctgtcggaaatagtgtttataaacgatgtgatcatgaagcatcgactgtct
ggagccaaggcgcagatgatcaacgaagactgggagtttttgcaattgcattgtgcgcta
tacattaatagtgagacatcgggtattcctctcaatatgcagcccaagaagtcgagtaga
ggactggtacaaaggcttaaaggaaaacaaggtcgattccgtggcaacctttctggaaaa
cgtgtagatttctctagtagaactgtaatctcccctgatccgaatctccgaattgaacag
gttggtgtgcctgtgcatgtggccaaaatcctcacgttcccggagagagttcactcagcc
aacatggcgctgatgaaggaactgatcattaacgggccggatgtacatccaggtgcaaac
tttgtcgagcagaaaggctccaaactgaagactttccttcgctacggcaacaggatgaaa
gttgctcaagaactcaaggaaggagatattgtggaacgtcatctaagagatgacgatata
gtattattcaacaggcagcctagtcttcacaaactgagtataatgtcgcataaagcaaaa
gtgttggagcatcgaacattcagattcaacgaatgtgtttgcactccttacaacgcagac
ttcgatggagatgaaatgaatctccatctgcctcaaactgaagaagccagagctgaagcg
catattcttatggggaacaaatcaaacctggtgacaccgaggaacggggaactgttgatc
gccgccacacaggacttcatcaccggctcctatctgctgactcagaaggacacctttctc
ggcaaagaggaggcatgtcagctggtcgccactctctttgctggcgaagatgtattccta
cacgtcgaccttcctccgcctgccattcgcaagcctcgagtgttatggactggaaagcag
atattcagcatgcttttgaaaccaaacaaacagtgtccaatcgaagccaacctacgagcc
aaaggcagagcgtacacatctgatgaagagctctgtgtcaaagattcttttgtggtgatc
cggaactcagagcttttggcgggcacaatggacaagtcaacgctaggctctgggggcaaa
aacaacatattctacgtgctgctgcgcgactggagcgaagaagcggccaccactgtcatg
tggcgactggggcggcttgagtcgcactacatcatgaatcgcggcttcagcattggcatc
ggtgacgtcacacctgggctgggtctgttgcgggcaaagaatcggctgttgcatgctggt
tactcgaaatgcaaccagtacatcgaggagctggcctcgggtcaactgcaatgccagccg
ggatgctcaggcgagcagaccctcgaggcggtcatcctgaaggagttgtcggtcatccgc
gaccacgccggcaagtcctgcttgaaagagctgcgaccgagcaacagtccgctcatcatg
gcgctcagtggatccaaaggatctttcatcaacatatcgcagatgattgcatgtgtaggc
caacaggccatcagcggcaaaagagtcccagacggcttcgaagatagggcattgcctcac
tttgaacgacacactaaaattccagcagccaaanggttcgtagaagacagtttctattcg
ggcctgactccgactgagttcttctttcacacaatgggtggcagggagggactggttgac
acggctgtcaaaactgccgaaactggttacatgcagagaagactgatcaaatcgctggaa
gatttgtgcctcaactacgacatgactgtacgtaactcgattggagatattgttcagttc
tgctacggaggtgatggattggatccaacttacatggaaggtaacggttgtcctgtagaa
ttgaaacgtgtttgggaaaatattcgagctagatatccaagtcgagatgaagatgccctt
gatccagaagaagtactgcagtccacgattgagctgttcaaatccaatgactttgattgc
tgtagtgaggagtttaggaaccagatgaaaaaattcttggaaagcattgccatgaaaata
gcattggagagagaaggaagaccgaatataccagttgtgaaggagctggagagagtcacg
ctgtcgcaattgatcaatttctgtcacgtgtgctgtgaaaaatatatgaaagcgaaaata
gagccaggtactgctgtgggagcgctggctgctcagagtattggcgaacctggaactcag
atgaccttgaaaactttccattttgccggagtggcttccatgaatatcactcagggagtt
cctaggataaaagaaatcatcaatgcgagcaagctcatcagtacaccaatcataaccgct
caccttgaaaacgatactgatcctgagtatgctcgatgggtcaaaggccgcattgaaaag
accacattgggcgaggtttctgaatttattgaggaagtttatctacccgatgatagtttt
ctgttgatcaaactcgatgttgaaagaatcaggctgttgaaactggaagtagatgccgaa
tcaataaggtttagtatgtgcacctcaaaactgcgtctgaagccaaaccaagtgcaagta
caaagcaagagtataatcacggtgaaaccgatttcaattaagagcagtactgactcccag
ttgcagtttctcaaagagaatgtacccaacgttgttatcaagggaattccgtcagtgaac
agagctgtgattcacgaagaagaaagaaacggtaaaaagacttacaagctgctcgtggaa
ggtgacaatctgagagaggtgattgcaacttacggcgtcaaaggcactcaaacctggtcc
aacaacacctaccaagtgtataagacgcttggcatcgaagctgctaggtcaacaataatg
acggaaatcaaggtggtgatggagaaccacggcatgagcatcgatcacagacacgccatg
ttggtggcggacctgatgaccagccggggggaggtgctggggatcacccgtcacggactg
gccaagatgaaggagtctgtgctcaatttagcgtcgtttgagaagaccgctgatcacttg
tttgatgccgcgtaccacggccagacggaccaagtgacgggagtgtcagagtccatcatt
cttggcatcccaatgtccattggaactggcctcttcaagttaatgcacaagatggacaga
ggtgataaacttccgaagagaactctgctattcgacaacgccatctatcacaaaaacaca
gcgcccgttcctgttgcttaa
DBGET
integrated database retrieval system
