Nilaparvata lugens (brown planthopper): 111052267
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Entry
111052267 CDS
T07276
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111052267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111052267
Enzymes [BR:
nlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111052267
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111052267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
RNA_pol_Rpb5_C
HMG_box_2
S6PP_C
VPS28
Motif
Other DBs
NCBI-GeneID:
111052267
NCBI-ProteinID:
XP_039285485
LinkDB
All DBs
Position
5:56512267..56533028
Genome browser
AA seq
1687 aa
AA seq
DB search
MEGGKFHKDFRGLNSVKPQSLTFGLLSYDDIVNLSATKIITPMTFDPLGHPIPGGLYDPM
MGPVKRDDKCPTCGYTYNDCVGHMGYIDLPVPVINPLFHSAVNFLMMSSCNKCYSVVIPF
SKKILLINQLKLLNHGFVKEAIELESIFNDEVEGKERKSDNLLLNELEKHVEHILKSSNS
LLLPEVVEIRSMQQLHDQFISNGFQSTRKADCPHCHQRYQKVKVLKRQLIANVTMEVADK
YGDKGNSKKVTEAGQTYITPSETLKQLRQVWNKDKSLLSELFPVLRTTSSKTPTDLFFFL
IVPVTPCCYRPVKFLNGIISENIQNKLYKTILDDCLVIRSIIHVMNNPESDSLSLEHREL
ISRIRGSTYSEKLQFSWHGLQGHCDLLVESNRSSYGSLADVNLLGLKQLIEKKEGLIRKN
MMGKRVNFAARSVITPDPNLNIDEIGVPDAFAKTLTYPVPVTSWNVKSLRKMVMNGPNVH
PGAVLIVTEEGERIRISPDNPTHRESLANRLLTPGSSKTKGMKIVHRHLTDGDILLLNRQ
PTLHRPSIMAHKARILKNEKTLRLHYSNCKSYNADFDGDEMNAHFPQNELARSEAYNLVN
VSNQYLVPKDGTPLGGLIQDHIISGVRMSIRGRFFTRSDYMQLVYQALPYIHGNLVLLPP
TILKPVQLWSGKQIISTIILNVIPKGKVPINLVSTSKISFKAWQKGKPRPWIAGGTPFTN
PITMTEAEVIIRNGELLCGVLDKTHYGATPYSLVHCLYELYGGTCSTNLLSSFGKLFTSF
LQIHGFTLGVKDILVNEKADAERLKHVKDVREAGIIAATQALELPPDTDRQTLKASLEEA
YKKDKKFSALIDRQYKSCLDSYTNRINSACMPEGLIESFPDNNLQLMVQSGAKGSTVNTM
QISCLLGQIELEGKRPPLMVSGRSLPSFPPYEVSARAGGFIEGRFMTGIQPQEFFFHCMA
GREGLIDTAVKTSRSGYLQRCLIKHLEGITVNYDQTVRDSDGCVIQFLYGEDGKDVTKSQ
FFKDQQIPILVENRDAVLNRDNIEHLERVTNMDVIHEHRRKMKRWLKFVKKHDLKGKIRL
NPFTLFSATEQPSHESNKSMKKSSRTVRNHSLVKKWRSLDEDNKSKYIEKIKAKPDPLTS
ILQPDRHFQVISEKLDELIDNYLKNNSCGGRGEAEVREVVSVWSMQSMCAGGEPVGILAA
QSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPAVEVPFLMHVPKIE
KKAERLRKRLTRITVAEVLHYCTVTERQILQEPKRIQLYDIRFNFLPKHCYKDKTHIGPE
EIIKHIEDKFILEIVNLERKKRDIRRKEDFVSSEGRCDISLYALQFHESRMQNDLVRDVN
RDTDNSEDEDDPGDGDATSARIKARRVEEQEYDDPEEEENLSDDDEDEDKDSVTREKDDE
SGASDEEKEENTKEESKKKLSTQEVETRIKKVKWLSTCIEDYKFDVEKSLWCQVTVGFPH
SHGRIDFASVLRERAAASVIHEVAGINRAFTFKNKDTIMLKTDGRNFSQMFRHSTLLELS
KLYSNDIHSIAKTYGIEAAARLIVKEVQEVFKVYGIVVDPRHLLLIADYMTFDGTIQPLN
RVGMRGGLSPLQQMSFEASTNFLKTAILQAKTDSLQSPSSRLVVGQPCRTGTGAVDVRMA
TSVFLSS
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggcaaattccataaagattttcgaggcctaaactcggtgaagcctcagtcg
ttgacatttggattattatcatatgatgatatagtgaatctaagtgctacgaaaattatt
actcctatgacgtttgatccgcttggacacccaattcctggaggtttgtatgatccgatg
atgggacctgtcaaaagggatgataaatgtccaacttgtggctacacctataatgattgt
gttggacatatgggatacattgatcttccagttccagtaattaatcctctttttcattcc
gcagtcaattttttaatgatgagttcttgcaacaagtgttattctgtagtgataccgttt
tctaagaaaatccttctaatcaatcaactaaagttactcaatcatgggtttgttaaggaa
gcaatagagcttgaatcaatattcaatgatgaggttgaaggtaaggagaggaagtctgat
aatctcctcctgaatgaattagaaaaacatgtcgagcatattctaaaatcaagcaacagt
cttttgctgcctgaagtagttgagatccgttctatgcaacagttgcatgaccagttcata
agtaatggttttcaaagtactagaaaagcagattgtcctcattgccatcaacgttaccag
aaggttaaagtcctgaaaaggcagttaatcgcaaatgttacaatggaagttgcagataaa
tatggagataaaggaaattccaaaaaagttactgaagcaggtcagacttacatcactcca
tcagaaactctgaaacaattgagacaagtctggaacaaagataagagtctcctaagtgag
ttatttcctgttctgagaaccacttcatccaagactccaacggatttgtttttctttctt
attgtacctgttactccttgctgctacagacctgtaaaatttttaaatggtataatcagt
gaaaatattcagaataaactttataagacgattttagatgattgtcttgttataagaagc
attattcacgtgatgaataatccagagtctgatagcctttcacttgagcatagagaactg
atctccaggattcgtggctccacatactccgagaaattgcaattttcttggcatggcttg
caaggtcattgtgatttgttggtagaaagtaacagaagctcgtatggctcattggctgat
gtcaatctattaggtttgaaacaactgattgaaaagaaggaagggcttatcagaaaaaat
atgatgggaaagagggtcaattttgctgcgcgatcggttataacacccgacccaaatttg
aatatcgatgaaatcggtgtaccagacgcgtttgctaaaactctgacctatcctgttcct
gtcacatcatggaatgtcaagtctttgcggaaaatggtgatgaatggaccaaatgttcat
ccaggtgctgttcttatagtaacagaagagggtgaacgtatcagaataagccctgataat
cctacccacagagaaagtttggccaacaggctcttgactccgggaagtagtaaaacaaaa
ggcatgaaaattgttcataggcatttaacagatggtgatattctcctattaaataggcag
ccaacattgcatagacccagtataatggctcacaaggcacgcatactaaaaaatgaaaaa
acactgcgtcttcattattcaaactgcaagtcatacaatgctgattttgatggtgatgaa
atgaatgctcactttccacagaacgaattggcgcgtagtgaagcatataatcttgttaat
gtgagcaatcagtatcttgtaccaaaggatggaacgcctctgggaggtctcatacaggat
cacataatctcaggagtgcgcatgtcaattagaggcagattcttcacacgtagtgactac
atgcaacttgtctatcaagctctgccctacattcacggcaatctagtgctactgccacca
actattctcaagcctgtccagctgtggtctggaaagcaaattatatcgactatcattcta
aatgttattcccaaaggaaaagtgcccataaatttagtttctacatcaaaaatcagcttc
aaagcttggcagaaaggcaagccaagaccatggattgctggcggtactcctttcacaaat
cctatcacaatgactgaagccgaagttatcattcgtaatggagagttgctgtgtggtgtt
ttggacaaaacacattatggtgccactccctacagtttagtgcactgtctctatgagctg
tatggtggaacctgctccacaaatcttcttagctctttcggaaagcttttcacatcgttt
ctgcagatacatggtttcactctgggtgtgaaagacattcttgtgaatgaaaaagcggat
gcagagcgactgaaacatgtgaaggatgtgagagaagctggtatcatagctgcaactcag
gcgctagaactgccaccggacacagatcgccaaactctgaaagcatcactggaagaagct
tacaagaaagacaagaagttcagtgccctgatcgacagacaatacaaaagttgtctggac
tcctacacgaatcggataaactctgcgtgcatgcctgagggactgatcgaaagtttccct
gacaataatttgcagttgatggtgcagtcgggagcgaaaggatcgacggtcaacactatg
cagatctcatgtcttttgggtcagatcgagttggaaggcaaacgtccccccctgatggta
tcgggccgatcgttgcccagcttccccccctacgaggtgtccgccagggccggtggtttc
attgaaggccgattcatgactggaatccaaccgcaagaattcttcttccattgtatggct
ggaagagaaggcttgatcgatacagccgtgaaaactagtcgcagtggttacctgcagcgg
tgtctgatcaaacatctggaaggaatcaccgtaaactacgaccaaacagtgcgagacagc
gacggatgtgtcattcagttcctgtacggagaagatggcaaggatgtcaccaagtcccag
ttcttcaaagatcagcagattcccattttggtcgaaaatcgtgatgctgttttgaaccgt
gataacatagagcatttggagcgtgtaaccaatatggatgttatccatgagcatcgtagg
aagatgaaaaggtggctgaaatttgtaaagaaacatgacttaaaaggcaagattaggcta
aatcctttcacactatttagtgcgaccgaacaacccagtcatgaatcaaacaagagcatg
aagaagtccagccgcactgtacgaaatcactcattggtcaagaaatggcgcagtttggat
gaagacaacaaatccaagtacattgaaaagataaaagcaaaaccagatcctctgacatca
atcttgcaacctgatcgacacttccaagtgatatcggaaaagttggatgagctgattgat
aattacttgaaaaacaacagttgcggcggtagaggagaggcggaggtgcgggaggtggtg
agcgtgtggtcgatgcagtcgatgtgcgcgggcggggagccagttggcatcctggcggcg
cagagtgtcggcgagccctccacgcagatgacactcaacacattccacttcgctggccga
ggcgagatgaacgtcaccctcggcatcccccggctgcgggagatcctcatgatggcctcc
aagaacatcaagacaccagccgtcgaagtgcccttcctcatgcatgttcccaaaattgag
aagaaagcggaacgtttgaggaagagattgacgaggatcacagtagccgaggtgctgcac
tactgcactgtcactgaacgacagatattgcaggagcccaagcgaattcagttgtatgac
atccgtttcaacttcctgccaaagcattgctacaaggacaagacgcacattggacccgag
gaaattatcaagcatatagaagataaattcattctagaaattgtcaacctggagaggaaa
aagagagatattcgcaggaaagaagattttgtttcgtcagaaggcagatgtgatatttca
ctttatgcgttgcagttccatgagagcaggatgcaaaacgacttggtgagagatgtgaac
agagatacggacaactctgaagacgaagatgaccctggtgacggagacgctacctctgcc
agaatcaaagctcgtagagtagaagaacaagagtatgatgaccccgaagaagaagaaaat
ctatcagacgatgatgaagacgaagataaagatagtgtaacgagagaaaaagatgatgaa
agcggagctagtgatgaagagaaggaagaaaatactaaagaagaatcaaaaaagaaacta
tcaactcaagaagtggagactaggataaagaaagtgaaatggttgtctacatgcatcgag
gattacaaatttgacgtggaaaagtcactgtggtgtcaagtgacggttggcttcccacac
agccacggtcgaatcgactttgccagtgtgctgcgcgagcgagccgccgcatcagtcatc
cacgaggtggccggcatcaaccgcgcgttcaccttcaagaacaaggacaccatcatgctc
aaaaccgacggtcgcaacttctcgcaaatgttccgccactccaccctgctcgaactcagc
aagctctactccaacgacattcacagcattgccaagacgtacggcattgaggctgccgcc
aggcttatagtcaaggaggttcaagaagtgttcaaggtttacggaatcgtggtagatccg
cgccatctgctgttgatcgccgactacatgacgttcgacggcacgatccagccgctgaac
cgagtgggcatgcgcggtgggttgtcgcctctgcagcaaatgtcgttcgaggcttcgacc
aacttcctgaagacggccatcctacaggccaagactgattcgctgcagtcgccgtcaagt
cggctggttgtcggtcagccgtgtcgcacgggtaccggagccgtcgacgtccgaatggct
accagcgttttccttagctcatag
DBGET
integrated database retrieval system
