Nomia melanderi (Alkali bee): 116434907 Help Entry 116434907         CDS       T07404                                  Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism nmea  Nomia melanderi (Alkali bee) Pathway nmea03030   DNA replication nmea03410   Base excision repair nmea03420   Nucleotide excision repair nmea03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nmea00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     116434907    03410 Base excision repair     116434907    03420 Nucleotide excision repair     116434907    03430 Mismatch repair     116434907  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:nmea03032]     116434907    03400 DNA repair and recombination proteins [BR:nmea03400]     116434907 Enzymes [BR:nmea01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      116434907     6.5.1.6  DNA ligase (ATP or NAD+)      116434907     6.5.1.7  DNA ligase (ATP, ADP or GTP)      116434907 DNA replication proteins [BR:nmea03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     116434907  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      116434907 DNA repair and recombination proteins [BR:nmea03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      116434907    NER (nucleotide excision repair)     Other NER factors      116434907    MMR (mismatch excision repair)     Other MMR factors      116434907 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme FERM_N_2 Motif Other DBs NCBI-GeneID:  116434907 NCBI-ProteinID:  XP_031849684 LinkDB All DBs Position Unknown AA seq 940 aa AA seqDB search MAQRSITAFFTKSTTKKNGSETNNSSKSNDNGERDSPGNSKRKRDNSSDNSESSSPPLAK KVENSSSKTSGTTSPVKKANGKTSKIKLSPVTPKENEKRKAKTPLTASKKKKKVEEVKGT PKKNSTKKKTVEKENINQTKKDSGLEQKKGTASSNNESSKSSSDESSETKSKQNTKKVVK KRLRIIAPVDDSSDEDGHLPVKIPCSPEKESVSDQETNAPNEENESNNEIEEVTESNEKE EDEKQKDEKQEEQTEKPVKKIHNFFAPNKKENGKDSNIDKKKTASHSYNPSISNYNPIKD AFWKQGEKVPYIALTRTLELIEDTSARLKIVEILSNYFRSVIALSPNDLLPSVYLCLNQL APAYEGIELGVAETNLMKAIAQCTGRTLAQIKADVQQVGDLGIVAEGSRSNQRTMFQPAP LTISTVYTKLKEIAQMTGNSSLSKKLDKIQTLFVACRFTEARYLIRSLAGKLRIGLAEQS VLQALALACTMTPPEQGSPPEILDTSKKMSSDAFKQKYDETALILKTTYCECPNYDKIIP VLLKEGIKKLPEKCKITPGVPMKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHL AEDGDISIYSRNQENNTSKYPDIIGRFSKTKGEDVKSCILDCEAVAWDTEKQQILPFQIL STRKRKDATEADIKVQVCVFIFDLLYLNGEPLVKEPFIKRRELLKTHFKESDGEWKFATS LDTTKMEEVQDFLDESVKGNCEGLMVKTLEQEATYEIAKRSRNWLKLKKDYLDGVGDTLD VVVIGGYIGKGKRTGTYGGFLLACYDKENEEYQSICKIGTGFSEEDLQKHTESLKEHIVS QPKSYYRYDTSHQPDHWFEPVQVWEIKCADLSLSPAHRAAMGIVDPEKGISLRFPRFIRI RDDKNAEEATSAQQVASMYSSQEQVKNQASGTKATEEDFY NT seq 2823 nt NT seq  +upstreamnt  +downstreamnt atggcacagcgtagcataacggcctttttcacaaagtcgactacgaagaagaatggcagt gagacaaataattcaagcaaatctaatgacaatggagaacgagatagtccaggtaattct aaacgaaagcgggataatagctcggataacagtgaatcttccagtcctccacttgctaag aaagtagaaaatagttcttcgaagacatcaggaactacttcaccggtaaagaaggctaat ggaaaaacatctaaaattaagttgtcacctgtgacacctaaagaaaatgagaagaggaag gcaaaaactccacttaccgcttctaagaagaaaaagaaggtagaagaggtaaagggtaca cccaagaaaaatagtacaaaaaagaaaactgtggaaaaggaaaatataaatcaaacaaag aaagattcaggtttagaacagaaaaaggggacagcttcttcaaacaacgaatcatcaaaa tcctcttcagatgagtctagtgaaacgaaatcaaaacaaaatactaaaaaagtggtcaaa aaaagattaaggataatagcacctgttgatgattctagtgacgaagatggtcacttacct gtgaagataccatgcagtccagaaaaagaaagtgttagcgaccaagaaacaaatgctcct aatgaagaaaatgaatctaacaatgagatagaggaagttaccgaaagtaatgaaaaagaa gaagatgaaaaacaaaaagatgagaaacaagaagaacaaacagaaaagcctgtcaagaag atacataatttctttgctcctaacaaaaaggaaaatgggaaagatagcaatatagataaa aaaaagactgcaagccattcttataatcctagtatatctaattataatccaataaaggat gcattctggaaacagggtgaaaaggttccatacatcgcgctaacgcggacactagaactg atagaggacacaagcgctcgattaaaaatagtagaaattctgtccaattactttagatcc gttatagctttaagtccaaatgacttgcttccaagtgtatatttgtgtctcaatcaactg gcaccggcttatgaaggaattgaattgggtgtagcagaaacgaatcttatgaaagctata gcacaatgtactggtagaacattagctcaaataaaagctgatgtacaacaagttggagat ttgggcattgtagcggagggaagtcgttccaatcagaggacgatgtttcaaccagcccct ttgacaatatcaactgtatacactaaactgaaggaaattgctcaaatgactggcaattcg tctttatctaagaaactggataaaattcagacactttttgtagcatgtcgattcaccgaa gccagatatttaattaggtctttagctggcaagcttcgaattggtttggctgaacagtct gtattacaggcgttagcgttagcgtgcacaatgactccgccagagcagggctcaccgccg gaaatattggatacaagtaaaaagatgtctagcgatgctttcaagcaaaagtatgatgag acagcgcttatccttaaaacaacatactgcgaatgtcccaattatgataaaatcattcct gttttactgaaagaggggattaagaaattacctgagaagtgcaaaattacacccggtgtc cctatgaaaccgatgttagcgcatccgactaaaggtgtacaggaagttctaacacgtttc gagggattgaaattcacttgtgaatggaaatacgatggggaaagggcgcagatacatctc gctgaagatggtgatattagtatttatagtagaaatcaggaaaacaatactagtaagtat cctgatattattggacgattcagtaaaacgaaaggggaagatgttaaaagttgcatcctc gactgcgaagcggttgcttgggataccgagaaacaacaaatactaccatttcaaatactt agtaccagaaagcgcaaggacgcgaccgaggcagatattaaagtacaagtatgtgtattt atattcgatttattatacttaaatggagaaccactagtgaaagaacccttcataaaacgt cgcgagttgttgaagacgcattttaaagaatcagatggagaatggaaatttgcaactagc ttagacaccactaaaatggaagaagtacaggacttcttagacgagtcggttaagggcaat tgcgagggtctcatggtgaaaaccttggagcaagaagctacgtatgagatagctaaacgt tctcgaaattggttgaagttgaagaaagattatttggatggtgtaggcgatacattagat gtagtagttatcggaggatacatagggaaagggaaaagaacgggaacttacggaggattt cttttggcatgttacgataaagaaaatgaagaatatcaaagcatctgcaagattggtact ggattcagcgaagaagatcttcaaaaacacactgaatctttgaaagagcacatagtatcg cagccaaagtcttactatcgatacgacacgtctcatcaacctgatcactggtttgaacca gttcaagtttgggaaataaagtgtgcagatttgtctctgtcacctgctcacagggcagcc atgggtatcgttgacccagaaaagggaatctctttaagattccctcgattcattcgtatc cgcgatgataaaaatgcagaagaagccacatcggcgcaacaagtagcttcgatgtacagc agtcaagagcaagtcaaaaatcaagcgtcaggaacgaaagctacagaggaagatttctat taa

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