Numida meleagris (helmeted guineafowl): 110402429
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Entry
110402429 CDS
T06015
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110402429 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nmel04090
]
110402429 (VCAM1)
04091 Lectins [BR:
nmel04091
]
110402429 (VCAM1)
CD molecules [BR:
nmel04090
]
Proteins
110402429 (VCAM1)
Lectins [BR:
nmel04091
]
I-type lectins (Siglecs)
110402429 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set
C2-set_2
ICAM1_3_5_D2
ICAM_N
Ig_6
DUF2808
Izumo-Ig
Receptor_2B4
C1-set
Syndecan
Motif
Other DBs
NCBI-GeneID:
110402429
NCBI-ProteinID:
XP_021260174
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All DBs
Position
7:11846117..11891443
Genome browser
AA seq
541 aa
AA seq
DB search
MLKQMGRTSQTMLIILYVLKTVEAFEMEIIPASKAVAQIGETLILTCNTTGCALPKFSWR
AQMDYPLGGKVYNNKTYSTLTMNPVSAESSNTYLCTVLCNKEKKEKNVQVEIYSFPSDPV
IETSTSLVVGETATVICKIHDVFPSDHLEILLKKEEHILHRKTFYGDVSTKTETKTVAYS
FNLTTEDNGKEITCVARLQIADMDFEPKERLTSLKLNANFGPQNTFINASPGNSSMEGHS
LKLTCVTESNPPAQVVWRKHLANETIQHFIENNVLSIPHAHFTDSGQYICEVINPVTNKT
EKAAVNIVIQAPPKNTTLTVFPSSSVKEGESVTISCTAAAVPAVQIILEKKIGDVTTTLK
TEDGKYTIDKAQPKDAGKYECTFTNKFGSHSLDIELDVKVPPQNITVLVYPSENVKEGEN
VTITCSTYSNPPSQMILKKVNQDKEIILPAVNGTFTLYNVTKNDTGRYLLDVFNEVGNNI
KVIEIAVVGKLEKPNQIMPLIIAFSCVTAIAIPVVAILIYVSRKAKINGSYSLVKALRLK
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacagatgggaagaacaagccagactatgctaattattttgtatgtattaaaa
actgttgaagcttttgaaatggaaattataccagctagcaaagctgttgcacagattgga
gaaacactgatactcacatgcaacactaccggctgtgcattaccaaagttttcatggaga
gcccaaatggactacccccttggaggaaaagtgtacaataacaagacatactctaccttg
actatgaatccagttagtgctgaaagtagcaacacttatttatgtactgtcctctgcaat
aaagagaaaaaagagaagaatgtccaagttgaaatttactcttttcctagtgatcctgtc
attgaaaccagcacatctttagttgttggagaaactgccactgtcatctgtaaaattcat
gatgtgtttccttctgatcacctggaaatactcctaaagaaagaggaacatattcttcat
cgcaaaactttttatggagatgtcagcacaaaaacagaaaccaaaactgtggcatattca
tttaacctcacaactgaagacaatggtaaagagattacttgtgtggccagattacaaatt
gctgatatggactttgagcccaaagaaagattaacttctctgaaactgaatgcaaacttt
ggtccacaaaatactttcattaacgcatctccgggaaactcatcaatggaaggacactct
ctaaaacttacttgcgtgactgagagtaatccaccagcgcaagtagtttggagaaagcat
ctggcaaatgaaaccattcagcatttcatagaaaacaatgtcctttctattcctcatgcc
catttcactgactcaggacagtacatctgtgaagtaattaatcctgtaactaataaaacc
gagaaagcagctgtgaacattgttatacaagctccaccaaaaaatacaacactcacagtt
ttcccctcaagttcagtgaaagaaggagaaagtgttaccatctcttgcacagctgcagct
gtcccagctgttcagattatcctagaaaagaaaataggtgatgtgaccacaactcttaaa
acagaagatggcaaatacaccatagacaaggctcagccaaaggatgcaggaaaatatgag
tgcacattcactaacaaatttggaagtcattctctggacatagaacttgatgtcaaagtt
cctcctcagaatattactgtgttagtttatccatcagaaaatgttaaagaaggagaaaat
gtcactattacgtgtagcacatacagtaacccgccatcacagatgatcctgaaaaaagtt
aatcaagacaaagaaattattctcccagcagtcaatggaacctttacactctacaatgtc
actaaaaatgatacaggcagatatttgcttgatgttttcaatgaggttggaaacaacatc
aaagtgatagagatagctgttgtgggaaaattggaaaaaccaaatcaaattatgcccctg
attattgcattctcctgtgtaacagcaatagcaatacctgtggttgcaattttgatctac
gtgtcaagaaaagcaaagataaatggatcctacagtctcgttaaagcactgaggctgaaa
gtgtga
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