Nosocomiicoccus massiliensis: CJ229_004770
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Entry
CJ229_004770 CDS
T09499
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
nmy
Nosocomiicoccus massiliensis
Pathway
nmy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJ229_004770 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmy03021
]
CJ229_004770 (rpoE)
03400 DNA repair and recombination proteins [BR:
nmy03400
]
CJ229_004770 (rpoE)
Transcription machinery [BR:
nmy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJ229_004770 (rpoE)
DNA repair and recombination proteins [BR:
nmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJ229_004770 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF2087
Motif
Other DBs
NCBI-ProteinID:
WOS95421
UniProt:
A0AAF1BUS0
LinkDB
All DBs
Position
complement(888950..889441)
Genome browser
AA seq
163 aa
AA seq
DB search
MRLDEFTKEMIDEQAFIDMAYIYLDDLEKETDLYSIIDKFQEIGGYTEKEIENRILQFYT
DLNTDGRFVSTEDGVWGLRKWFTVDDINDKIAPTVHKFEVVDNELDEFDELDEELDDEDI
EDIDEEDDEDIDEAIDDEDIDTTDLNIDEGDTLEDDYGDGDDY
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgagattagatgagtttacaaaagaaatgatcgacgaacaagcgtttattgatatggct
tatatttacttagatgatttagaaaaagaaactgatttatattcaattatcgacaaattc
caagaaatcggtggatatactgagaaagaaatcgaaaatcgtattttacaattttataca
gacttaaatacagatggtcgttttgtttctactgaagacggtgtatggggtcttagaaaa
tggttcacggtggatgacatcaacgacaaaattgcaccgacggttcataagtttgaagtc
gtcgacaatgaacttgatgaattcgacgaacttgacgaagaacttgacgatgaagacatc
gaagatatcgacgaagaagacgatgaggatatcgatgaagctattgatgatgaagacatc
gacactacggatttaaacatcgatgaaggcgatacgctcgaagatgattacggtgacgga
gacgactattaa
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