Candidatus Nitrospira neomarina: PQG83_04870
Help
Entry
PQG83_04870 CDS
T09428
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00730
Thiamine metabolism
nneo01100
Metabolic pathways
nneo01240
Biosynthesis of cofactors
nneo04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PQG83_04870 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PQG83_04870 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nneo03016
]
PQG83_04870 (thiI)
Enzymes [BR:
nneo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
PQG83_04870 (thiI)
Transfer RNA biogenesis [BR:
nneo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PQG83_04870 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
WNM63089
UniProt:
A0AA96K421
LinkDB
All DBs
Position
complement(1090004..1091206)
Genome browser
AA seq
400 aa
AA seq
DB search
MLHVLVHYHELALKGGNRKYFEYRLVHHLRGALKPLAHVHVEALQGRIRVSFEDEAAWPR
LQEQVKRVFGIVNFSLTRAVPLAYDQSDLTVLKDAIIAHLPTHPYATFRVSAKRADKRFV
KTSMDVEREIGGAVADHTGKRVNLSHPDMTILVELVPPYAYYSCQRVAGPGGLPTGTGGK
VICLISGGIDSPVAAYRMMKRGCKAVFVHFHGRPYLSRVSEEKVRDQVALLTKYQLSSRL
HLIPFGDIQSQIVITTPPPVRVVLYRRLMLRIATCIAEQEEAWALATGDSLGQVASQTPE
NISVINEATSLPILRPLIGMDKLEITQQAQALGSFETSIEPDQDCCTLFVPKHPQTRCQL
PHILKVEQALDIPQLVQQSLQGKELVTFSHAERMDRRAPQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgtcttagtgcattatcatgaactcgcccttaagggaggcaaccggaaatat
ttcgaataccggttagtccaccatctgcgaggagccctgaaacccctggcacatgtgcat
gtcgaagcactccagggacgaatacgggtgagcttcgaggatgaggcggcgtggcctcgc
ttgcaggaacaggtcaagcgcgtattcggtatcgtcaatttttctttgaccagagccgtg
ccattggcttacgaccaatccgatctcacggttctcaaagacgcgatcattgcgcacctg
cccacacatccctatgccacctttcgggtcagtgccaaacgggcagacaagcgattcgtc
aaaacttcaatggacgtggaacgagaaatcgggggcgccgtcgccgaccataccggcaag
cgagtcaacctttcacaccccgatatgacgattttggtcgagttagtcccgccctacgcc
tattactcctgtcaacgggtggcgggacccgggggactaccgacggggaccggaggaaaa
gtcatttgcctcatttccggtggtatcgattctccagtggcagcctatcgcatgatgaaa
cgtggctgtaaagccgtctttgtacattttcacggtcggccatatctctcacgggtttct
gaggaaaaagtccgcgatcaggtcgccttgcttacgaagtaccaactgtcttcccgcctt
catctcattccctttggggatattcaaagccaaatcgtcatcaccacaccgccacccgta
cgcgtggtgctttaccgtcgcttgatgctccgcatcgccacatgcattgccgagcaggag
gaggcatgggccctcgcgaccggagacagtctgggtcaggtggcgtcccaaacaccggaa
aatatttctgtcattaacgaagccacgtcacttcccattcttcgtccgctcatcggaatg
gataagttggaaatcacgcaacaggctcaagcgctgggatcgtttgagacctccatcgaa
ccggaccaagactgctgcaccctctttgtcccaaaacatccacaaacacgatgccagcta
ccccatatcctcaaagtcgagcaagccctcgacattccccagttggttcagcagagccta
caaggaaaggaattggtcactttctcccatgcagaacggatggatcgaagggcaccacag
tag
DBGET
integrated database retrieval system
