Nipponia nippon (crested ibis): 104013326
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Entry
104013326 CDS
T05756
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nni03016
]
104013326 (TRDMT1)
Enzymes [BR:
nni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
104013326 (TRDMT1)
Transfer RNA biogenesis [BR:
nni03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104013326 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
104013326
NCBI-ProteinID:
XP_009464091
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
METHGMIRDQISQGILGDRNVDFRVVETGLVYQEVRSLFSACGCNSDHSLSAWIKSLSEE
SCTSAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITLKEFDRLSFDMILMSPPCQPF
TRIGLQGDVSDPRTKSFLYILDVLPRLQKLPKYLLLENVKGFESSSARNELLRTLETCGF
KYQEFLLSPTCLGIPNSRLRYFLIAKLHEESFSFQAPGQILTRFPDQHLEDLFKDKVTDK
VGEASSALSSEEKNLNPSIGPDCSSKKSLPKGAFLFKLETVEEIERKHGQDNDSSIQMLK
DFLEEENEEMSQYFLPPKSLLRYAFLLDIVKPTCRRSTCFTKGYGHYVEGTGSVLQTALD
VQLESVFKHIEELPEEEKLMKLSTLKLRYFTPREIANLHGFPPEFGFPEKVTIKQRYRLL
GNSLNVHVVAKLISVLLG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcacgggatgatacgtgatcaaattagccagggtatccttggtgaccgtaat
gtagatttccgggtggttgaaactggtcttgtatatcaggaggtacggtcactgttttct
gcctgcggctgtaacagtgaccacagcttatctgcttggataaaaagcctcagtgaagaa
agctgcacatctgcagaagttgttgctgctgttgatgtgaacactcttgccaatgaagtt
tataagcacaactttcccagcacgccattatgggcaaagacaattgagggcataacactg
aaagaatttgacagattatcttttgatatgattttgatgagtcctccctgtcagccattt
acaagaattggcctgcaaggtgatgtatccgatccacggacaaagagctttctctatatt
cttgatgttctcccaaggctccagaagcttccaaaatacctacttttagaaaatgttaaa
ggatttgaatcctcttctgcgagaaatgaacttttgcgaacactagaaacatgtggattt
aaatatcaagaatttctcttgtctccaacctgtcttggcattcccaattctaggctgaga
tattttctaattgcaaagcttcatgaagaatcattttcctttcaagctcctggtcagata
ttgacaagattcccagatcagcatctagaagacttattcaaggacaaagtcactgacaaa
gtgggtgaagctagctctgccttgtcttctgaagagaagaatctcaatccaagcattggt
cctgattgcagcagcaagaagagtttaccaaaaggggcctttctttttaagcttgaaaca
gtagaagaaattgaaaggaaacatggtcaggacaatgattcctctattcaaatgctaaaa
gatttcttggaagaggaaaatgaagaaatgagtcagtatttcttaccaccaaagtcctta
ttgcgctatgctttcttgttagacattgttaagcccacctgccggagatccacatgcttt
acaaaagggtatggacactatgtagaagggacaggctcagttctgcagacagcattagat
gtacagcttgaatctgtgtttaaacacattgaggagttaccagaagaagagaagcttatg
aaattatcaacactaaaactgaggtactttaccccaagagaaatagcaaatcttcatgga
ttccctccagaatttggctttcctgaaaaagtaacaataaagcaacgctaccgtcttctg
ggaaacagcctcaatgtacatgtggtggcaaaattgatctccgttctacttggataa
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