Nipponia nippon (crested ibis): 104016494 Help Entry 104016494         CDS       T05756                                  Symbol BRIP1 Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism nni  Nipponia nippon (crested ibis) Pathway nni03440   Homologous recombination nni03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:nni00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     104016494 (BRIP1)    03460 Fanconi anemia pathway     104016494 (BRIP1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nni03400]     104016494 (BRIP1) Enzymes [BR:nni01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104016494 (BRIP1) DNA repair and recombination proteins [BR:nni03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      104016494 (BRIP1)    FA (Fanconi anemia) pathway     Downstream FA components      104016494 (BRIP1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD_2 Helicase_C_2 DEAD ResIII Motif Other DBs NCBI-GeneID:  104016494 NCBI-ProteinID:  XP_009467666 LinkDB All DBs Position Unknown AA seq 1261 aa AA seqDB search MSSDVSEYTIGGVKIVFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA LSWQQSLYEKSLLTSSYEKEDRKPETSPPCRCMCHSQSKSNEAATSENHGAAASFNNYET GSSIKPGSPLTNSGCKGNETLASKLAAKKRLPLCDNENDDFQVDRKRIRPLETEQQVRKR HCFAKGVQLVDALEVYRQKKNGELIVHSEKSVKPTTFSPQTSSGPCTECSCSSGKETDKD TSHTKKKENGDRSFIPKIFFGTRTHKQISQITRELKRTAYSSVPMTILSSRDYTCIHPVV SNSGSNRNEMCVELLEGKHGKSCLYYHGVHKLSEHHALQSAHRMYQAWDIEDLVSLGKKL RACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDCARESVS YGVTESQLRAAREELDLMVNNNIRQKDHEPLRAVCCSLTNWLRESSSQLVERGYETSCKV WSGKEMLPILHKMGITGITFPILQKHLATVLEKEERISVLGREELIEIPIVSPATQIVLK GLFMVLLCLFKDNSRYADDYRVALQQTYTWMNENQLDVSDTSAAFARPKHKRSARQKTVV HMLNFWCLNPAVAFSDLSDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW VGTVGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKDR WMHTGLWRSLELVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSE GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGHQWYEIQAYRALNQ ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFGSALESLHAFAVR NQKSIDHSSECSSEFLHRPSNSKDLSQASQQEATIHLSPDVPAKREEQNLVSETNVTTTI SSVNPTASNQPSGQKVDAGSHSHHVAQRRKHMDSTPKMPATEIEREKKDGWTNADIMKEH CCFKPLTSTPLPVAKNCTSTASSKQKNVSRASELIDSVNQCQSLISEHKPSVPESCLETT NFSVKNTEAPVAEEHPDKLQLQVEPCSEFPXAGGKSELSTLNVSAEAEDEDESIYFTPEL YDDVESEEEKITPLLPTCNINENRIECGNFTVTEDLFAINTSETLSVTKKVIDDDGRSTS LHGIMQNEGSKHSAVNNVEMTSEIETEQIASQEMDTKKQKISLSRSRNKGVSSFLLNNTS T NT seq 3786 nt NT seq  +upstreamnt  +downstreamnt atgtcttctgatgtgtccgaatatactatcgggggagtgaagatcgtattcccttgcaag gcttacccttcacaacttgctatgatgaatgccattgttaagggcttaaataacaggcaa cactgtttgttggagagccctacaggaagtggcaaaagcttggcattgctttgttctgca ctgtcatggcagcagtctctgtatgagaaatcactgcttacgtcatcatatgaaaaggaa gacagaaagccggagacctcaccgccatgtcgctgtatgtgtcattcccaatctaagagc aatgaggccgcaacaagcgagaatcatggtgctgctgcttcttttaataattatgaaaca ggaagttccataaaacctggaagcccgctaacaaactcaggatgtaagggaaatgaaacg ctagcctcaaaattggctgccaaaaaaaggttacctctgtgtgacaatgagaatgatgat tttcaagtagacaggaaaaggattcgtcctttagaaactgagcagcaggttagaaaacgt cattgttttgcaaaaggagtgcagctagttgatgctttagaagtttatcgtcaaaaaaaa aatggagagctgattgttcactctgaaaaaagtgtgaaacccactactttttctccccaa acatcttctggtccttgcactgagtgttcctgttcttctggaaaagaaactgataaagat actagtcacacaaagaagaaagaaaatggagatcgatcgttcattcccaaaatatttttc ggaacacgaacacacaagcaaatatcccagattactagagagttgaagagaacagcgtat tccagtgtccctatgacaattctttctagccgggattatacctgtattcatccagtggta tctaatagtggtagtaacaggaacgaaatgtgtgtagaattgctggaaggaaaacatggc aagtcctgtctttactatcatggtgttcataaactcagtgaacaccatgccctacagtct gcacataggatgtatcaggcttgggacattgaagatctagtgagcctgggaaagaagctt cgtgcctgtgcatattttgcagccagagaactcatggtgggcgcagatattgtattttgt ccttataattatcttctagacccgcagatacgggagagcatggaaattaacctaaaaggc caagtagtcattttagatgaagcccataatattgaggactgtgctcgagagtcagtgagc tacggtgttacagaaagtcaactaagagctgctcgagaagagctagatctcatggtcaat aacaacatcaggcagaaggatcatgagccccttcgggctgtgtgctgctctttgacaaac tggttacgagagagctctagtcaactagtagaaagagggtatgaaacttcctgtaaggtt tggagtggaaaagaaatgctccccattttgcacaaaatgggaataactggtattactttt cccattttacagaaacatcttgctactgtcctggaaaaagaagaaagaatatcagtgctc ggtagagaggaacttattgagataccgattgtgagccctgccactcagattgtgctgaaa gggttattcatggttcttttatgtctttttaaagataatagcaggtacgcagatgactac agagttgctctacaacaaacttacacttggatgaatgaaaaccaacttgatgtttcagat acaagtgctgcctttgcacggcccaagcataaaaggagtgcgcggcagaaaaccgtagtc cacatgcttaatttttggtgcttgaatcctgccgtggctttttcagacttaagtgatgtt agaacaattgttctgacatctggtacactctctccaatggattcattttcttcagagctt ggcgtaaagttttctattcagctggaggcaaatcacgttattcggaactcacaggtttgg gttggcaccgttggagcaggccctaacggtcggaagttatgtgccacattccagcataca gaaacctttgagttccaagatgaggtgggagcacttctgctttcagtgtgtcaaacagtt ggccaaggaattttgtgcttcttgccatcctataagctgttggacaaattaaaagatcgc tggatgcacactggcttatggagaagcctggagctggttaagacagtcattgcagagcct caaggcggggcaaagagtgactttgatgaactgctgaaaatatactatgatgcaataaaa tgtaaaggagaaaaagatggagcactccttatagctgtgtgcagaggaaaagttagtgaa ggcttggatttctgtgatgagaatgcccgtgcagttataaccataggtattccgtttcca aatgtgaaagaccttcaggttgaattaaagaggaagtacaatgaccagcacaaaaataca agaggccttttaccagggcatcagtggtacgaaattcaagcttatagggctctgaaccaa gccctgggaaggtgtataagacataggaatgactggggtgctcttattttagttgatgac cgcttccggaataaccctaataagtacataactggattatctaaatggattcgtcaacaa atccagcaccatgaaaattttggtagtgcacttgaatcattgcatgcatttgctgtaaga aaccagaagagcattgatcattcatcagagtgcagcagtgaatttctccatcgaccctca aattcaaaagacctgtcacaagcctctcaacaggaggcaactattcatctgtcaccagat gttcctgctaaaagggaggagcaaaatttggtttcagaaactaatgttactacaaccatc agctcagttaatcctacagcatcaaatcagccaagtggccagaaagttgatgcagggagt cattctcaccatgtagcacaaagaagaaaacatatggactccacacccaaaatgccagca actgaaatagagagagaaaaaaaggacggctggactaatgctgatattatgaaagaacat tgctgctttaaaccactgacttcaacacctttgcctgtagccaagaactgcacgtccaca gctagtagcaaacaaaagaatgtgagtagggctagtgaacttattgatagtgtaaatcaa tgccagtcattaatttcagaacataaaccaagtgtaccagaatcatgtttggaaacaact aatttttcagttaaaaatactgaggctccagttgctgaagagcatcctgataagctacag cttcaagttgagccctgcagtgagtttccnnnagcaggagggaaatctgaactttcaaca ttaaacgtatctgcagaagctgaagacgaggatgagagtatctatttcacaccagaactc tatgatgatgtagaatcagaggaagagaaaatcacaccactgcttccaacctgtaatata aatgagaatcggattgaatgtggaaacttcacagtcactgaggatctttttgcaatcaac acctcagaaacactaagtgtgactaaaaaagtgattgatgatgatggcagaagcacaagt ttacatggaataatgcaaaatgaggggagtaagcatagtgcagtaaataatgtagagatg actagcgaaatagaaacagagcagatagcgtctcaagagatggatactaaaaaacagaaa atcagtctttccagatcacgaaataaaggtgtgtcatcttttctattgaacaatactagc acgtag

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