Nelumbo nucifera (sacred lotus): 104588556
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Entry
104588556 CDS
T04131
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nnu03016
]
104588556
Enzymes [BR:
nnu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
104588556
Transfer RNA biogenesis [BR:
nnu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
104588556
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
104588556
NCBI-ProteinID:
XP_010244836
UniProt:
A0A1U7YWH0
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Position
Un
AA seq
627 aa
AA seq
DB search
MEDIEDLLVGSGGAPPGFRLPLTAVGMKPRRNKPNNHASKEQNTKFQGLSPTSSPEVPGT
QTIYMKTFGCSHNQSDSEYMAGQLAAFGYVLSDNPEESDLWLINTCTVKSPSQSAMDTLI
IRCKNAKKPLVVAGCVPQGSRDLKELQGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKT
LPALDLPKVRKNEFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVIADGV
KEIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDRSTMLRIGMTNPPFILEYLEEIANV
LSHPCVYSFLHVPVQSGSDSILTAMNREYTVSEFRIVVDTLMRLVPGMQIATDIICGFPG
ETDEDFSQTVGLINEYKFPQVHISQFYPRPGTPAARMKKVPSNIVKKRSRELTSIFESFT
PYQGMEGQVEKIWITEIATDGIHLVGHTKGYVQVLVNAPESMLGTSTNVKITSIGRWSVF
GEVIDTLDQIPDTTFSGIKSTVDKFHLCSDLYETCACSGQPEPCACAEQNCKEQNVVRKS
TNTRADKSLEEQKSRNPIGWLCRRRKVQRPECMVNGHAVKPIEKQVMRKRLGELGVIDWA
LLFGILVSFFTILALLLDLTFRMQSSK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaagatttgttagttggaagtggaggagctccacctggctttcgctta
ccattgacggccgtgggaatgaagcccaggaggaacaagcccaataaccatgccagcaaa
gagcagaacactaaatttcaaggcctctcacccacttcctcacctgaagtaccaggcacc
cagactatttacatgaaaacttttgggtgctcacataaccagagtgatagcgagtacatg
gctggtcagcttgcagcgtttggatatgtgttgagtgacaatcctgaggagtctgacctc
tggctgataaatacatgtactgtaaagtctcctagtcagtctgccatggatactttaatt
ataagatgtaagaatgcgaaaaagccattggtggtggctggatgtgtacctcaaggcagt
cgagatctaaaggaattacaaggagttagtatagttggagttcagcaaattgatcgtgtg
gttgaagttgtagaagagactctaaaaggtcatgaagtgcgacttttgaaccgcaagaca
ttgcctgcacttgaccttcctaaggtgagaaagaacgaatttattgagattcttcccatt
aatgttggttgtttaggtgcttgcacttattgcaagacaaagcatgctcgtgggcattta
ggtagttatactgtggacagccttgtagagcgtgtgcggactgttatagctgatggagtg
aaggaaatatggctaagcagtgaagatactggagcatatggtcgtgatattggggttaat
cttccaattttgcttaatgctattgttgcggaacttccccctgacaggagtacaatgctt
cgcattggaatgactaatcctccttttattcttgagtacttagaagagatagccaacgtt
ctgtctcatccgtgtgtatattcctttcttcatgtacctgttcaatctggaagtgactca
attctgactgcaatgaatcgggaatatactgtgagtgaattcagaattgttgtagatact
ttgatgcgacttgtacctgggatgcagattgctactgatattatttgtggatttcctggt
gaaactgatgaagatttttctcaaacagtcggccttattaacgagtacaagtttcctcaa
gttcatatttcacagttctatcccagacctggaacgcctgctgcaaggatgaagaaagtt
ccaagtaatatagttaagaaaaggagtcgtgaattgacttcaatctttgaatccttcaca
ccatatcagggaatggaaggtcaagtagagaaaatatggatcactgaaattgcaactgat
ggaattcacttggtgggtcataccaagggatatgtgcaggttcttgtaaatgctcctgaa
agcatgcttggaacatcaaccaacgtaaagataacatccattgggaggtggtcagtgttt
ggtgaagtgattgacactcttgaccaaataccagacactacattcagcggaataaaatcc
actgtggataaatttcatctttgctctgatctgtacgagacttgtgcatgctcaggacag
ccagagccatgtgcttgtgcagagcaaaactgcaaggagcaaaatgttgtgagaaaaagc
accaacacaagggctgacaagtcactggaagaacaaaagagtaggaacccaattgggtgg
ttatgtaggaggcgaaaggttcagaggccagaatgcatggtaaatggacatgctgtgaaa
cctatcgagaaacaagtgatgaggaaaagattgggtgagctgggtgttattgattgggct
ctactatttgggatacttgtgagcttttttacaattttagccttgcttttagatctgact
tttaggatgcagtcgtccaaatga
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