Nelumbo nucifera (sacred lotus): 104595228
Help
Entry
104595228 CDS
T04131
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104595228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104595228
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104595228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
104595228
NCBI-ProteinID:
XP_010254152
UniProt:
A0A1U7ZYA0
LinkDB
All DBs
Position
Un
AA seq
1108 aa
AA seq
DB search
MQRQKSILSFFQKSSSESQSSDDSSYTDTLSRQHLVQFPRNQLKLNSSKSEQSNAPPSAK
DPWSEVRGTDTPPEKLPRRIFSTDLPANDDSRPSLFSSILHKFARVDERESSRDRNQANG
GSAGSYSTNIKIGDCQKLALQGAPSQHSRKDNPSNSSVTYRGDVAHVESAPDILGPETPA
MRPLVPRLKRIQEDSSNLEEKNDSSLFDPNKRVKLLQDSETANKNHRQASEMTTSKFEWL
DPSLMRDAKGRRPGDALYDKRTLYIPPDALKKMSASQKQYWSVKCQYMDVVLFFKVGKFY
ELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDDAVQKLLARGYKVGRIEQIETSN
QAKARGATSVIQRKLVHVMTPSTVVDGSIGPEAVHLLALKRGTGGLENGSVVYGFAFVDC
ATLKFWVGLIHDDASCAALGALLMQVSPKEVIYEDTGLSREAQKALKKYSVAGSTKLHLT
PMASITNFVDESEVRKLIQNKGYFKGSTKLWDSVLDGGVHHDLTICALGGLVGNLSRLKL
DDVLCNGDVLPYQVYKGCLRMDGQTLVNLEIFSNNADGGQSGTLYKYLDNCTTSSGKRLL
RSWICHPLRDVGDIDSRLNVVEELVTHSEITSLVAQYLRKIPDIERLLGRVKATVGSSAS
LLLPMVGEKVLKQRVKVFGCLVKGMRVGIDLLMILQKEEHLFLSLSKIMVLPLLTGSNGL
DEFLTQFEAALDTNFPKYQDHDVTESDAETLSLLVELFIEKDTEWSQVIHALNCIDVLQS
FAVAANSSCGSMCRPVVLPANSRSVTACRDIGAPVLKIRGLWHPYALGESGATLVPNDVH
LGEDTNGYCPQALLLTGPNMGGKSTLLRATCLAVILAQLGCYVPCEMCVMSPADIIFTRL
GATDRIMTGESTFLIECMETASVLQHATQESLVLLDELGRGTSTFDGYAIAYAVFRHLIE
KVHCRLLFATHYHPLTKEFASHPRVSLQHMACSFKSKSCSSKDDEELVFLYRLTSGACPE
SYGLQVALMAGIPREVVAVASKASQAMKQSIGQSFKSSECRSEFSSLHEEWLKTLLAVAR
AGHCSLADDDVFDTLLCLWHELKSLYCL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaaatctatcctctcgttcttccaaaagtcgtcgtcggagagccagagc
tctgatgactcttcatacactgacacgctttcccgccagcatctcgttcagtttccgaga
aaccaactgaagctcaactcgtcgaagtctgagcaatcaaatgctcctccttcggctaag
gatccctggtccgaagttcgaggaacagatactccgccggaaaagttaccgcgtcggatt
ttctccaccgaccttccggcgaatgatgatagccgaccttcactgttttctagtattctg
cacaagtttgcgagggttgatgaacgggagagctcgcgtgatcggaaccaagcaaatggt
ggttccgctggtagttactcaacaaatattaaaattggagattgtcaaaagttggctctg
caaggagcaccttctcagcattcccgtaaagataatccttccaattctagtgtcacttat
cgaggggatgttgcacatgttgaaagtgctccagatatattaggtccggagacaccagct
atgcgtcctcttgttcctcgtttaaagcgaattcaggaggacagttctaacttggaggag
aagaatgattcatctttgtttgatcctaacaaaagagtgaagttacttcaggattcagag
actgcaaataagaaccataggcaagcatctgaaatgactactagtaagtttgaatggctt
gacccttctttgatgagagatgctaagggaagaaggcctggagatgctctctatgacaaa
aggacgctgtatataccacctgatgctttgaaaaaaatgtcagcatctcagaaacagtat
tggagtgtcaaatgccagtatatggatgttgttctcttcttcaaagtggggaaattctat
gagctgtatgaactggatgctgagattggtcataaagaacttgattggaagatgacattc
agtggggtgggtaaatgcagacaggttggtatttctgaaagtggaatagatgatgctgtt
cagaagctacttgctcgtgggtataaagttgggcgaattgagcagatagagacatctaat
caagccaaagctagaggagctacttctgtgattcaaaggaaattggtgcatgtaatgaca
ccatcaaccgttgttgatggaagcattggacctgaagctgttcatcttcttgctttaaaa
cggggaactggtgggttagagaatggttcggttgtatatggatttgcatttgttgattgt
gctactttaaaattttgggttggtttgatacatgatgatgcttcttgtgcagctttgggg
gctttgttgatgcaagtttcacccaaggaagtaatttatgaagacacagggctgtccaga
gaagctcagaaggcactcaaaaagtattctgtagcaggttctactaagttgcatttgact
ccaatggcatcaatcaccaattttgtggatgaatctgaagtaagaaaactgattcaaaac
aagggatactttaaagggtctactaaattgtgggattctgtacttgatggtggtgttcac
catgacctcaccatatgtgcccttgggggacttgttgggaacttatctaggttgaagtta
gatgatgttctatgtaatggggatgttttaccttaccaagtctacaaaggctgccttagg
atggatggccaaacactggtaaatcttgagattttcagcaacaatgctgacggtggtcaa
tcaggtactttatataaatatcttgataactgcacaacatcatctggcaaacgtctttta
aggagctggatttgtcatccactaagggatgttggggatatcgatagtaggcttaatgtg
gttgaggaactagtaacacattcagaaataacttcccttgtggctcaatatcttcgaaag
attcctgatattgaaaggcttcttggacgagtgaaggctactgttgggtcctcagcttca
cttttattgccaatggttggggaaaaagtactgaaacaacgagtgaaagtatttggatgt
cttgttaaaggaatgcgtgtaggaattgacttgctaatgatactacagaaagaagagcat
ttgttcttgtcattgtctaaaattatggttcttccacttctaactggtagcaatgggctt
gatgaatttcttacccaatttgaagcagctttggataccaattttccaaagtatcaggat
catgatgtgacagagtcagatgccgaaacattatctcttctggttgagttatttattgaa
aaagatactgagtggtctcaagtcatccatgccttgaattgcatcgatgtgctacaatcc
tttgctgttgctgcaaattcttcatgtgggtctatgtgtagacctgttgtcttgcctgct
aattctagatctgtgactgcttgccgggatattggagcacctgtacttaagatcagaggc
ctttggcatccatatgcgcttggagaaagtggggccacacttgtccccaatgatgtacat
cttggtgaggacacaaatggctactgtccccaggctttgctgttgactggaccaaatatg
ggtggaaagtcaactcttctgcgtgctacatgtctagcggttatattggctcagctgggt
tgctatgtgccttgtgagatgtgtgttatgtcacctgcagatattatattcacgcggctt
ggtgcaactgaccgaatcatgacaggcgagagtacctttcttatcgaatgcatggaaaca
gcatcagttcttcaacatgccactcaagagtctctggtccttcttgatgaacttggtagg
ggaacaagcacttttgatggatatgccattgcatatgctgtattccgtcatctcattgaa
aaggttcactgccgtttactgtttgccactcattatcaccctctcacaaaggaatttgct
tcccatcctcgtgtgtcactgcaacatatggcctgcagttttaagtcaaaatcatgtagc
tctaaagacgacgaggaactggtttttctttaccggctcacatcaggtgcatgtccagag
agttatggactgcaagtagcactcatggctggcatcccaagagaggtggttgcagttgca
tcaaaggctagccaggcaatgaaacagtcaattggccagagtttcaagtcaagtgaatgt
agatcagaattttccagtctccatgaagaatggctgaaaaccctgttggctgttgcaagg
gctggacactgtagtttagctgatgatgatgtgtttgatactttgctttgcttgtggcat
gagttgaaaagcttatattgcttgtga
DBGET
integrated database retrieval system
