Nelumbo nucifera (sacred lotus): 104598798 Help Entry 104598798         CDS       T04131                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism nnu  Nelumbo nucifera (sacred lotus) Pathway nnu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nnu00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     104598798  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nnu03400]     104598798 DNA repair and recombination proteins [BR:nnu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      104598798 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor Motif Other DBs NCBI-GeneID:  104598798 NCBI-ProteinID:  XP_010259326 UniProt:  A0A1U8AB67 LinkDB All DBs Position Un AA seq 1312 aa AA seqDB search MAPSRRLSNGRSPLVSQQRQITSFFSPGKSSTSPSSVSPVVPKQNPKPNPSTSPSPAPTP SPSETKQRKPPLVVGSSPSRSPLTPLSEAVTTPVSGKKLYGEEVVGKRLRVYWPLDKSWY EGCVKSFNKKTGKHLVQYDDAEEEVLDLGVEKVEWTKGEVRSFRRLRLSSACENVVPDEE ENAEDASDGDDSTDEDWGQNLGKEIIEDDSEEMDLEEEEVNEEVKDTKKSSGKNMASGKR KNFEWDKVGSGKKIKSVGNVEKGVLNVTKVTLDSGSRLVEAASDANRRYVSHITGNTLTG DSAERFALRDAEKLRFLGEGRRDSERRRPGDANYDPKTLYLPSDFLKSLSGGQRQWWEFK SKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLARKG YRVLVVEQTETPEQLELRRKEKGCKDKVVKREICAVVTKGTLTEGEMMSVNPDASYLMAV SEGCQISGKQKEDVVIGVCVVDVSTSRFMLGQFGDDMERNSLCSLLSELRPVEIIKPAHV LSPETEKVLLTHTRSPLINDLVPVLEFWDAEKTINEVRRIYKHLNQSVSGSVNEASLGNS AFSVGSDGSGCLPDVLSELVSMGDNGSCALSAFGGCLFYLRQALLDETLLRFAKFELLPC SGFHDIPQKSYMVLDAAALVNLEIFENNKNGGSSGTLYAQLNHCVTAFGKRLLKSWLARP LYHVVLIRERQNAVAGLKGVLPTAVEFRKEMSRLQDMERLLARLFANSEANGRNANKVVL YEDAAKKQLQEFTTALRGCELMVQACTSLGAILDSVKSHLLQHLLTPGKGLPDVHSILKH FKDAFDWIEADKTGRIIPHEGVDVEYDSACKKVEEIESSFLKHLKEQRKVLGDVSIKYVT VGKESYLLEVPESMQRTVPRDYELRSSRKGFFRYWTPTVKKLLGELSQAEAEKESKLKSI LQKLIGHFCEHHIKWRQLVSTTAELDVLISLAIASDYYEGATCQPIISGLSCSTEMPCLS AKGLGHPVLRSDALGKGTFVPNDVCIGGSGSPSFILLTGPNMGGKSTLIRQVCLAVILAQ LGADVPAESFELSPVDRIFVRMGAKDHIMSGQSTFMTELSETASMLSSATRNSLVSLDEL GRGTSTSDGQAIAESVLEHFVQKIQCRGMFSTHYHRLSVNYQKDPKVSLCHMACQVGKRT GDVEEVTFLYRLTPGACPKSYGVNVARLAGLPDMVLQKAAAKSREFEAIYGKNRQGSEVQ VFTESWNNEFAVFSQDLFNVLANSSCQESCEDKSVRLLVELQQKARSIVERG NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atggctccttctcgtcgcctcagcaatggacgttctccattggtcagccaacaacgccaa atcacgtccttcttctcccccgggaagtcctcaacttccccttcttctgtttctccggtt gttccgaaacaaaaccccaaacctaaccctagtaccagccctagccctgctccaactccg tctccttcggagacgaaacaaagaaagccccctctagtagttggttcatctcccagtcgt tctcctctaacacctctttctgaagctgtaacaacgcccgtttcggggaagaaactctat ggagaagaggttgtagggaagagacttagggtttattggccgttggacaaaagctggtac gaaggttgtgtcaaatcatttaataaaaaaactggtaagcatttggtacagtatgatgat gctgaggaggaagttttggatctcggggttgagaaggttgagtggacgaagggggaggtc agaagttttcgtcggctgcgtctgagttccgcttgtgaaaatgtagttccagacgaggag gagaatgcagaagatgcaagtgatggggatgattccacagatgaagactgggggcaaaat ttaggcaaggagattattgaagatgattcagaagagatggatttagaggaagaggaggtc aatgaggaagttaaagacactaaaaaatctagtggaaaaaatatggcttccggaaagaga aaaaatttcgaatgggataaggtaggctctggtaagaagatcaagagtgttgggaatgtt gagaagggtgtgttgaatgtgacgaaggttacgttggacagtggaagcaggctagtagag gccgcaagtgatgctaataggagatatgtatctcatattactggcaacaccttaacaggt gattctgcagagcgatttgccttgcgtgatgcagaaaagttacgctttcttggggaggga cgcagagactctgaaaggagacgtcctggagatgcaaattatgatcctaaaactctttat ttgcctagtgactttttaaagagcttatcaggcggccagagacaatggtgggagtttaaa tcaaagcatatggacaaggttctatttttcaagatgggcaagttttatgaactgtttgaa atggatgcacatataggagcaaaagaacttgatttgcaatacatgaagggagagcaacct cattgtggattcccggaaaagaacttctcactcaatgtagagaaattggctagaaagggt taccgagttcttgttgtggaacaaacagaaacacctgagcagcttgagcttcgtcgcaaa gagaaaggctgtaaagataaggttgtgaaacgtgaaatatgtgctgtggtcacaaaagga acactgactgagggtgaaatgatgtcagtcaatcccgatgcttcttacctgatggcagtg agtgaaggctgtcagatttcagggaaacaaaaagaggatgtggttattggtgtatgtgtg gtcgacgtttctacaagcaggtttatgcttggacagtttggagatgatatggaacgcaat tccttatgttccctactctctgagttaagacctgtagaaatcataaaacctgctcatgtg ctgagtcctgaaactgaaaaagtattactgacacatacaagaagtcctttgatcaacgat ttggttccagttttggaattctgggatgcagagaaaaccattaatgaagttaggagaatt tacaagcatctgaatcaaagtgtgtctggatctgtgaatgaagctagcttgggtaattct gcttttagtgttgggagtgatggttcagggtgcctaccagatgttttatctgagctagtg agtatgggagacaatggaagctgtgccctttctgcttttggagggtgtcttttctattta aggcaggctcttctggatgagactttgctcagatttgctaaatttgagttgcttccctgc tcagggtttcatgatatcccacaaaaatcatatatggtacttgatgcagctgcccttgtg aacctagagatatttgagaacaacaaaaatggaggatcttcagggacactatatgcacaa ctaaatcactgtgttactgcatttgggaaaagattgcttaaaagctggcttgcaaggcct ctgtaccatgtggtgttgattagggaacgccagaatgcagttgcaggtttgaagggagtt ctacctactgctgttgaatttcgaaaagagatgtctagacttcaggatatggagcggttg ttggcacgcctctttgccaacagtgaagctaatggaaggaatgccaataaagtagtcctt tatgaggatgcagcaaagaaacaacttcaagaatttactactgcattacgtggttgtgaa ttgatggtccaagcatgcacttctctcggtgctatactggattctgttaaatctcatcta ctccaacatttattgacacctggaaaaggtctacctgatgtccattccattctaaagcat tttaaggatgcttttgattggatagaagctgataagacaggacgtattataccccatgaa ggagttgatgtagaatatgactctgcctgtaaaaaagttgaggaaattgaatctagcttt ttaaagcacctcaaggaacaacgaaaagtacttggagatgtttcaatcaaatatgttaca gttggaaaagagtcatatcttctagaagtgcctgagagcatgcaaagaactgttcctcgg gattatgaattacgatcatccagaaagggattcttcaggtattggactccaacagttaag aagttattgggagaactttctcaagctgaagctgaaaaggaatctaaattgaaaagcatt cttcagaagttgattgggcatttctgtgagcatcatattaagtggaggcagttggtttct actaccgcagaactggatgttttgatcagtttagcaattgcaagtgactattatgaagga gccacatgtcaaccaatcatctcaggcctatcatgttcaactgaaatgccatgcttgtct gcaaaaggattaggacatcctgttctcagaagtgatgctctaggcaaaggtacatttgtc cctaatgatgtatgtattggtggttctggaagtcccagctttatccttctcacaggcccc aacatgggtggtaaatcaactcttattcgccaagtctgcctggctgtaattttggcacaa cttggagcagatgtcccagcagaaagctttgagttatcacctgttgatagaatttttgtt cgaatgggtgcaaaagaccacattatgtcaggccagagtacattcatgacagaactttca gagactgcatctatgctgtcttcagcaactcgtaattcactagtgtcattggatgaactt ggacgtgggacatcaacttcagacgggcaagccattgcagagtcagttctggagcatttt gtccagaagatacaatgccgaggaatgttttctactcactatcaccggctatctgtgaac taccaaaaagaccccaaggtgtcactgtgccatatggcatgccaagttggaaagagaact ggagatgtggaagaagttacatttctttacagattgacacctggtgcatgccccaagagt tatggtgttaatgttgcaaggctggcagggcttcctgacatggtccttcaaaaggctgct gcgaaatcaagagaatttgaagccatatatggcaagaacaggcagggatctgaggttcaa gtgttcactgaaagttggaataatgagtttgcggttttttcccaagatttatttaatgtt ttagcgaattcaagttgccaggagtcttgtgaggacaagagtgttaggttgttagttgaa cttcagcagaaagcaaggtcaattgtggagcgaggttga

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