Nelumbo nucifera (sacred lotus): 104610226
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Entry
104610226 CDS
T04131
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03020
RNA polymerase
nnu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104610226
09124 Replication and repair
03420 Nucleotide excision repair
104610226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nnu03021
]
104610226
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104610226
Transcription machinery [BR:
nnu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104610226
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104610226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
104610226
NCBI-ProteinID:
XP_010275045
UniProt:
A0A1U8BEB7
LinkDB
All DBs
Position
Un
AA seq
321 aa
AA seq
DB search
MDGVSYQRFPKVKIREMKDDYLKFELRETDASIANALRRVMIAEVPTIAIDLVEIEGNSS
VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLHVRCDTDQTLDV
TSYDLRSSDPSVVPVDVAQHSESTGYDASEQRGIIIVKLRRGQELRLRAIARKGIGKDHA
KWSPAATVTFMYEPEIHINEDLMETLTLDEKRDWIESSPTKVFGLDPNTHQVVVVDPEAY
TYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVVNAIEVLKQKLDVVRP
SEETEEADDQFGELGAHMRGG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtttcttaccagcgatttccaaaggtgaagattagagagatgaaggacgac
tacctaaagttcgagctccgagagacggacgcaagtattgctaacgccctccgccgcgtg
atgattgcggaggtccccaccattgcaatcgacctggtcgaaatcgagggcaactcgtct
gtgctcaacgacgagttcatcgctcatcggcttggtctcatccctctgactagcgaacgt
gccatgggcatgcgcttctcccgtgactgtgatgcctgtgatggcgacggtcagtgcgag
tattgctccgttgaattccacctccatgtccgctgcgacacggaccagaccctcgacgtc
accagctacgacctcagaagctctgacccttccgtggttcccgttgatgttgcccagcac
tccgagtccaccggttacgatgcttctgagcagagggggattattattgtgaaattgcgt
cgtgggcaagaactgagactgagagccatagctagaaaggggattggcaaagaccacgcg
aagtggtcgcctgcagccactgttacctttatgtatgaacctgaaatccatattaatgaa
gatttgatggaaactcttactcttgatgagaaaagggattggattgaaagcagcccgacc
aaggtttttggccttgatcccaatactcaccaggttgtggtagttgaccctgaagcatac
acttatgacgatgaggtgataaagaaagcggaagccatggggaaaccaggacttgttgag
atttatgccaaagaagacagcttcattttcactgttgaatctactggtgccattaaagct
tctcaattggtcgtcaatgcaatagaagtgctaaaacagaagttggatgttgtgcgccca
tctgaggaaactgaggaagctgatgatcagtttggtgaactgggtgcacacatgcgtgga
ggatag
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