Novosphingobium sp. Gsoil 351: GKE62_16665
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Entry
GKE62_16665 CDS
T06443
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog00190
Oxidative phosphorylation
nog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GKE62_16665
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKE62_16665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nog03019
]
GKE62_16665
Enzymes [BR:
nog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GKE62_16665
Messenger RNA biogenesis [BR:
nog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GKE62_16665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QGN55943
UniProt:
A0A6I5X3T4
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All DBs
Position
3465537..3467696
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AA seq
719 aa
AA seq
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MLTERATAAVADEAPALAGEEPRFLNRELSWLHFNRRVLAEAANTSYPLLERLRFLSISG
TNLDEFFMVRVAGLRGQQLRKIEDRSIDGLTPSQQLPLITAKADALMADQQALWRELHAA
LGEHAIRVLELYEITRDEGSELERFFAEQLLPIITPQALDPAHPFPFIPNLGMSILFELK
RKADGEAVRELIMLPAALPRFYQFDEARPRFVALETVLRYFSEALFPGFEVVGSAAFRVV
RDSDIEIEEEAEDLVRYFRSAIKRRRRGRVIRLEAESAIPPELASLIARELGGDDAMISE
TDGLLGIADLAQIVDIDLPELKFEPYTPRFPERVREHDGDCFAAIREKDIVVHHPYESFD
VVLAFLRQAAGDPDVLAIKQTLYRAGKQGAVIRALCDAAEAGKSVTAVVELKARFEEEQN
LHWAAQLERSGVQVVYGFIELKTHAKISLVVRREGKAIRSYCHFGTGNYHPVTARIYTDL
SFFTADPQLAAEAAEVFNYITGYIEPQRLEQLAIGPLNLREKLYALIDREIANASAGKPS
GIWAKMNALSNRGVIDKLYEASAAGVPIRLIVRGVCCLRPGVPGLSDTIEVKSIIGRFLE
HSRVWAFANCAAMPGARTEVYISSADWMSRNLDRRVEYALPLRNPTVHDQVLEQVMLANL
LDDEQSWEMLPDGTYRKVVPGKRPFNLHTYFMTNPSLSGRGESLGEGGAVPKLTLHRRG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttgactgaacgcgcgaccgccgccgtagcggacgaggcaccggcattggctggcgag
gaaccgcgctttctcaaccgcgaactgagctggctgcacttcaaccgccgcgttctcgcc
gaggctgccaatacctcgtatccgctgctcgaacggttgcgtttcctgtcgatcagcggg
accaacctcgacgaattcttcatggtccgcgtcgcgggcttgcgcggccagcaattgcgc
aagatcgaggatcgctcgatcgacgggctgaccccgtcgcagcagcttccgctgatcacc
gccaaagccgacgcgctgatggccgaccagcaggccctgtggcgcgaactgcacgccgcg
ctgggggagcatgcgatccgggtgcttgaactctacgagatcacccgcgacgagggcagc
gagctcgaacggttcttcgccgagcagttgttgccgatcatcacccctcaggcgctcgat
cccgcgcacccgtttccgttcattcccaacctggggatgtcgattctgttcgagctgaag
cgcaaggccgatggcgaggcggtgcgcgagctgatcatgctgccggcggcgctgcccagg
ttctatcagttcgacgaagcccgcccgcgcttcgtcgcgctggagacggtgctgcgctat
ttcagcgaggcgctgtttccggggttcgaggtggtcggttcggccgccttcagggtggtc
cgcgacagcgacatcgagatcgaggaggaggccgaggacctcgtccgctatttccgcagc
gcgatcaagcgccgccgccgcggccgtgtgatccggctcgaggccgagagcgcgattcct
cccgaactcgccagcctgatcgcgcgcgagctgggcggtgacgatgccatgatcagcgag
accgacggcctgctggggatcgccgaccttgcccagatcgtcgacatcgacctgcccgag
ctcaagttcgagccctacaccccgcgctttcccgaacgggtgcgcgagcacgacggcgat
tgcttcgcggcgatccgcgagaaggacatcgtcgtccaccacccctacgaatcgttcgac
gtggtgctcgccttcctgcgccaggcggcgggcgatcccgatgtgctggcgatcaagcag
acgctctaccgcgcgggcaagcagggcgccgtgatccgcgcgctgtgcgacgcggcggag
gcgggcaagtcggtaaccgcggtggtcgagctgaaggccaggttcgaggaggagcagaac
ctccactgggcagcccagctcgagcgctccggcgtgcaggtggtctatggcttcatcgag
ctcaagacccacgccaagatcagcctggtggtgcgccgcgagggcaaggccattcgcagc
tactgccacttcgggaccggcaactatcatccggtgaccgcgcggatctacaccgacctc
agcttcttcacggccgacccccagcttgcggccgaggccgccgaggtgttcaactacatc
accggctacatcgaaccgcagcgcctcgaacaattggcgatcggcccgctcaacctgcgc
gagaagctctacgcgctgatcgatcgcgaaatcgcgaacgcaagcgcgggcaagccatcg
ggcatttgggcgaagatgaacgcgctttccaaccggggggtgatcgacaagctctacgaa
gcgagcgcggctggcgtgccgatacggctgatcgtgcgtggggtctgctgcctgcgtccc
ggcgtgccggggttgtccgacacgatcgaggtcaagtcgatcatcggccgcttcctcgag
cacagccgcgtctgggccttcgccaattgcgcggcgatgcccggcgcgaggaccgaggtc
tatatctcgtcggccgactggatgagccgcaatctcgaccgccgggtcgaatacgcgctg
ccgctgcgcaatccgacggtccacgaccaggtgctcgaacaggtgatgctggcgaacctg
ctcgatgacgagcagagctgggaaatgctgcccgacggcacctaccgcaaggtcgtgccc
ggcaagcgcccgttcaatctccacacctacttcatgaccaatccgtcgctttccggtcgt
ggagagtcgttgggcgagggtggcgcggtgccgaagttgacactacaccgccgcgggtga
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